RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 PSG1P11464 419 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 CCR6P51684 374 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 KLF9Q13886 244 aaPredicted RBP13□□□□□ -0.33
CIRBP-243ENST00000593128 NMSQ5H8A3 153 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 Q6ZTC4 211 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 TMED4Q7Z7H5 227 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 NRN1Q9NPD7 142 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 XCL2Q9UBD3 114 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 RABL2AQ9UBK7 228 aaPredicted RBP13□□□□□ -0.33
CIRBP-243ENST00000593128 CACFD1Q9UGQ2 172 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 RABL2BQ9UNT1 228 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 X6R8D5 127 aa13□□□□□ -0.33
CIRBP-243ENST00000593128 ELOA3CA0A087WX78 387 aaPredicted RBP12.99□□□□□ -0.33
CIRBP-243ENST00000593128 FABP12A6NFH5 140 aa12.99□□□□□ -0.33
CIRBP-243ENST00000593128 IGKV3-20P01619 116 aa12.99□□□□□ -0.33
CIRBP-243ENST00000593128 ANXA3P12429 323 aa12.99□□□□□ -0.33
CIRBP-243ENST00000593128 SLC35E1Q96K37 410 aa12.99□□□□□ -0.33
CIRBP-243ENST00000593128 LINC00052Q96N35 136 aa12.99□□□□□ -0.33
CIRBP-243ENST00000593128 HRH4Q9H3N8 390 aa12.99□□□□□ -0.33
CIRBP-243ENST00000593128 U3KQ87 197 aa12.99□□□□□ -0.33
CIRBP-243ENST00000593128 A0A0B4J2A0 478 aa12.98□□□□□ -0.33
CIRBP-243ENST00000593128 ZNF705EA8MWA4 302 aaPredicted RBP12.98□□□□□ -0.33
CIRBP-243ENST00000593128 BUB3O43684 328 aa12.98□□□□□ -0.33
CIRBP-243ENST00000593128 NUTF2P61970 127 aaKnown RBP12.98□□□□□ -0.33
CIRBP-243ENST00000593128 PPP1R14BQ96C90 147 aa12.98□□□□□ -0.33
CIRBP-243ENST00000593128 RNF125Q96EQ8 232 aa12.98□□□□□ -0.33
CIRBP-243ENST00000593128 HSPB7Q9UBY9 170 aa12.98□□□□□ -0.33
CIRBP-243ENST00000593128 SHPKQ9UHJ6 478 aa12.98□□□□□ -0.33
CIRBP-243ENST00000593128 APLNQ9ULZ1 77 aa12.98□□□□□ -0.33
CIRBP-243ENST00000593128 DNAH10Q8IVF4 4471 aa12.98□□□□□ -0.33
CIRBP-243ENST00000593128 TRAV10A0A0B4J240 114 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 IAPPP10997 89 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 TMBIM6P55061 237 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 TCTAP57738 103 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 FXYD7P58549 80 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 LYZP61626 148 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 SUPT4H1P63272 117 aaKnown RBP12.97□□□□□ -0.33
CIRBP-243ENST00000593128 ZNF90Q03938 601 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 OR2F1Q13607 317 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 GSG1LQ6UXU4 331 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 MCFD2Q8NI22 146 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 CELA1Q9UNI1 258 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 VPS13DQ5THJ4 4388 aa12.97□□□□□ -0.33
CIRBP-243ENST00000593128 IGHV4-4A0A075B6R2 117 aa12.96□□□□□ -0.33
CIRBP-243ENST00000593128 IGHV3OR16-12A0A075B7B8 117 aa12.96□□□□□ -0.33
CIRBP-243ENST00000593128 TNFSF8P32971 234 aa12.96□□□□□ -0.33
CIRBP-243ENST00000593128 DEFB1P60022 68 aa12.96□□□□□ -0.33
CIRBP-243ENST00000593128 SRPXP78539 464 aa12.96□□□□□ -0.33
CIRBP-243ENST00000593128 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.33
CIRBP-243ENST00000593128 C1QTNF4Q9BXJ3 329 aa12.96□□□□□ -0.33
CIRBP-243ENST00000593128 RBM38Q9H0Z9 239 aaKnown RBP12.96□□□□□ -0.33
CIRBP-243ENST00000593128 PFDN2Q9UHV9 154 aa12.96□□□□□ -0.33
CIRBP-243ENST00000593128 A6NHS1 94 aa12.95□□□□□ -0.34
CIRBP-243ENST00000593128 H3BMM0 161 aa12.95□□□□□ -0.34
CIRBP-243ENST00000593128 VAMP1P23763 118 aa12.95□□□□□ -0.34
CIRBP-243ENST00000593128 FAUP35544 74 aaKnown RBP12.95□□□□□ -0.34
CIRBP-243ENST00000593128 EMP1P54849 157 aa12.95□□□□□ -0.34
CIRBP-243ENST00000593128 GAMTQ14353 236 aa12.95□□□□□ -0.34
CIRBP-243ENST00000593128 PYDC2Q56P42 97 aa12.95□□□□□ -0.34
CIRBP-243ENST00000593128 COQ8AQ8NI60 647 aa12.95□□□□□ -0.34
CIRBP-243ENST00000593128 SLIRPQ9GZT3 109 aaKnown RBP12.95□□□□□ -0.34
CIRBP-243ENST00000593128 BATF3Q9NR55 127 aa12.95□□□□□ -0.34
CIRBP-243ENST00000593128 DEFB131BA0A096LNP1 70 aa12.94□□□□□ -0.34
CIRBP-243ENST00000593128 H3BMQ9 156 aa12.94□□□□□ -0.34
CIRBP-243ENST00000593128 NUP62P37198 522 aaPredicted RBP12.94□□□□□ -0.34
CIRBP-243ENST00000593128 GDF5OSQ5U4N7 250 aa12.94□□□□□ -0.34
CIRBP-243ENST00000593128 BCL7BQ9BQE9 202 aa12.94□□□□□ -0.34
CIRBP-243ENST00000593128 NDUFA13Q9P0J0 144 aa12.94□□□□□ -0.34
CIRBP-243ENST00000593128 DNAH6Q9C0G6 4158 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 FABP1P07148 127 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 HLA-DRB4P13762 266 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 GPX4P36969 197 aaPredicted RBP12.93□□□□□ -0.34
CIRBP-243ENST00000593128 ID1P41134 155 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 RAB11AP62491 216 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 C12orf74Q32Q52 190 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 TOMM5Q8N4H5 51 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 OR4B1Q8NGF8 309 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 WDR12Q9GZL7 423 aaKnown RBP12.93□□□□□ -0.34
CIRBP-243ENST00000593128 HLA-DRB4X5D2U9 266 aa12.93□□□□□ -0.34
CIRBP-243ENST00000593128 IGKV1D-37A0A075B6S9 117 aa12.92□□□□□ -0.34
CIRBP-243ENST00000593128 CCDC160A6NGH7 325 aa12.92□□□□□ -0.34
CIRBP-243ENST00000593128 SNRPGP15A8MWD9 76 aa12.92□□□□□ -0.34
CIRBP-243ENST00000593128 NKX2-1P43699 371 aaPredicted RBP12.92□□□□□ -0.34
CIRBP-243ENST00000593128 OR8G2PQ6IF36 304 aa12.92□□□□□ -0.34
CIRBP-243ENST00000593128 MAGT1Q9H0U3 335 aa12.92□□□□□ -0.34
CIRBP-243ENST00000593128 SEPSECSQ9HD40 501 aaKnown RBP12.92□□□□□ -0.34
CIRBP-243ENST00000593128 AP3S2P59780 193 aa12.91□□□□□ -0.34
CIRBP-243ENST00000593128 OR8I2Q8N0Y5 310 aa12.91□□□□□ -0.34
CIRBP-243ENST00000593128 PIGBOS1A0A0B4J2F0 54 aa12.9□□□□□ -0.34
CIRBP-243ENST00000593128 ATP5IP56385 69 aaPredicted RBP12.9□□□□□ -0.34
CIRBP-243ENST00000593128 SOSTQ9BQB4 213 aa12.9□□□□□ -0.34
CIRBP-243ENST00000593128 RNF126Q9BV68 326 aa12.9□□□□□ -0.34
CIRBP-243ENST00000593128 SCRT1Q9BWW7 348 aa12.9□□□□□ -0.34
CIRBP-243ENST00000593128 SAV1Q9H4B6 383 aaPredicted RBP12.9□□□□□ -0.34
CIRBP-243ENST00000593128 SLC25A22Q9H936 323 aa12.9□□□□□ -0.34
CIRBP-243ENST00000593128 DUXBA0A1W2PPF3 345 aa12.89□□□□□ -0.35
CIRBP-243ENST00000593128 F6UB75 175 aa12.89□□□□□ -0.35
CIRBP-243ENST00000593128 ZNF701M0R085 212 aaPredicted RBP12.89□□□□□ -0.35
CIRBP-243ENST00000593128 WRBO00258 174 aa12.89□□□□□ -0.35
CIRBP-243ENST00000593128 MED6O75586 246 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms