RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 DEDD2Q8WXF8 326 aa9.64□□□□□ -0.87
APOC1-209ENST00000592885 ACY3Q96HD9 319 aa9.64□□□□□ -0.87
APOC1-209ENST00000592885 SOSTQ9BQB4 213 aa9.64□□□□□ -0.87
APOC1-209ENST00000592885 SLIRPQ9GZT3 109 aaKnown RBP9.64□□□□□ -0.87
APOC1-209ENST00000592885 MCUBQ9NWR8 336 aa9.64□□□□□ -0.87
APOC1-209ENST00000592885 TBC1D24Q9ULP9 559 aa9.64□□□□□ -0.87
APOC1-209ENST00000592885 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
APOC1-209ENST00000592885 FABP12A6NFH5 140 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 DEFB4AO15263 64 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 NXPH3O95157 252 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 FABP1P07148 127 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 AKR1C4P17516 323 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 GPX4P36969 197 aaPredicted RBP9.63□□□□□ -0.87
APOC1-209ENST00000592885 AP3S2P59780 193 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 CSNK1G2-AS1Q8NCQ2 148 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 RNF125Q96EQ8 232 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 SLC35E1Q96K37 410 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 RAB40CQ96S21 281 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 RBKSQ9H477 322 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 X6R8D5 127 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 AGRNO00468 2067 aa9.63□□□□□ -0.87
APOC1-209ENST00000592885 TRAV10A0A0B4J240 114 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 H3BMQ9 156 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 RBMY1A1P0DJD3 496 aaKnown RBP9.62□□□□□ -0.87
APOC1-209ENST00000592885 RBMY1CP0DJD4 496 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 PSG1P11464 419 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 SLC25A6P12236 298 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 TNFSF8P32971 234 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 NKX2-1P43699 371 aaPredicted RBP9.62□□□□□ -0.87
APOC1-209ENST00000592885 KLF9Q13886 244 aaPredicted RBP9.62□□□□□ -0.87
APOC1-209ENST00000592885 RBMY1FQ15415 496 aaKnown RBP9.62□□□□□ -0.87
APOC1-209ENST00000592885 LYZL2Q7Z4W2 148 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 OR1S1Q8NH92 325 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 PRR13Q9NZ81 148 aa9.62□□□□□ -0.87
APOC1-209ENST00000592885 ZFP92A6NM28 416 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 DEDDO75618 318 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 HLA-DRB4P13762 266 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 TMEM128Q5BJH2 165 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 C1orf194Q5T5A4 169 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 SAMD13Q5VXD3 122 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 LRTM2Q8N967 370 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 MCFD2Q8NI22 146 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 TRIM63Q969Q1 353 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 HLA-DRB4X5D2U9 266 aa9.61□□□□□ -0.87
APOC1-209ENST00000592885 IGLL5B9A064 214 aa9.6□□□□□ -0.87
APOC1-209ENST00000592885 H3BMM0 161 aa9.6□□□□□ -0.87
APOC1-209ENST00000592885 PITX3O75364 302 aa9.6□□□□□ -0.87
APOC1-209ENST00000592885 HLA-DMBP28068 263 aa9.6□□□□□ -0.87
APOC1-209ENST00000592885 RAB11AP62491 216 aa9.6□□□□□ -0.87
APOC1-209ENST00000592885 GAMTQ14353 236 aa9.6□□□□□ -0.87
APOC1-209ENST00000592885 CLUHP3Q96NS8 147 aa9.6□□□□□ -0.87
APOC1-209ENST00000592885 SLC25A21Q9BQT8 299 aaPredicted RBP9.6□□□□□ -0.87
APOC1-209ENST00000592885 APLNQ9ULZ1 77 aa9.6□□□□□ -0.87
APOC1-209ENST00000592885 IGKV1D-37A0A075B6S9 117 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 ELOA3CA0A087WX78 387 aaPredicted RBP9.59□□□□□ -0.87
APOC1-209ENST00000592885 MED6O75586 246 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 CFDP00746 253 aaPredicted RBP9.59□□□□□ -0.87
APOC1-209ENST00000592885 ID1P41134 155 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 PSMB3P49720 205 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 SPATA31B1PQ5VZV4 182 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 Q6ZTC4 211 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 TOMM5Q8N4H5 51 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 CIB3Q96Q77 187 aaPredicted RBP9.59□□□□□ -0.87
APOC1-209ENST00000592885 NEU1Q99519 415 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 TRGV9Q99603 122 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 RNF126Q9BV68 326 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 PBDC1Q9BVG4 233 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 CLEC5AQ9NY25 188 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 TMED3Q9Y3Q3 217 aa9.59□□□□□ -0.87
APOC1-209ENST00000592885 FRAS1Q86XX4 4008 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 TMEM189A5PLL7 270 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 SNRPGP15A8MWD9 76 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 AMBPP02760 352 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 RPP30P78346 268 aaKnown RBP9.58□□□□□ -0.88
APOC1-209ENST00000592885 FOXI2Q6ZQN5 318 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 TMED4Q7Z7H5 227 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 THAP8Q8NA92 274 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 SAV1Q9H4B6 383 aaPredicted RBP9.58□□□□□ -0.88
APOC1-209ENST00000592885 SLC45A2Q9UMX9 530 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 V9GYH0 126 aa9.58□□□□□ -0.88
APOC1-209ENST00000592885 IGHV4-4A0A075B6R2 117 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 TEX48A0A1B0GUV7 120 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 SMIM9A6NGZ8 99 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 SOCS3O14543 225 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 VAMP1P23763 118 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 S100A7P31151 101 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 S100A5P33763 92 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 MEOX2P50222 304 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 LYZP61626 148 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 ZNF90Q03938 601 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 PYDC2Q56P42 97 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 ZNF705AQ6ZN79 300 aaPredicted RBP9.57□□□□□ -0.88
APOC1-209ENST00000592885 COQ8AQ8NI60 647 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 XCL2Q9UBD3 114 aa9.57□□□□□ -0.88
APOC1-209ENST00000592885 ZNF705FA8MVS1 300 aaPredicted RBP9.56□□□□□ -0.88
APOC1-209ENST00000592885 ISLRO14498 428 aa9.56□□□□□ -0.88
APOC1-209ENST00000592885 SFT2D2O95562 160 aa9.56□□□□□ -0.88
APOC1-209ENST00000592885 ZNF705DP0CH99 300 aaPredicted RBP9.56□□□□□ -0.88
APOC1-209ENST00000592885 ZNF705BP0CI00 300 aaPredicted RBP9.56□□□□□ -0.88
APOC1-209ENST00000592885 UBE2MP61081 183 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms