RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 BSXQ3C1V8 233 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 SERTAD4-AS1Q5TG53 156 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 GPR107Q5VW38 600 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 GSG1LQ6UXU4 331 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 SPATA12Q7Z6I5 190 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 TRPT1Q86TN4 253 aaKnown RBP5.33□□□□□ -1.56
VAT1-209ENST00000592388 STHQ8IWL8 128 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 CCDC71LQ8N9Z2 235 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 SYT8Q8NBV8 401 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 OR4X1Q8NH49 305 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 DCANP1Q8TF63 244 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 TMEM170AQ8WVE7 144 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 METTL26Q96S19 204 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 CLEC5AQ9NY25 188 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 CACNG5Q9UF02 275 aa5.33□□□□□ -1.56
VAT1-209ENST00000592388 CENPXA8MT69 81 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 CORTO00230 105 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 CD74P04233 296 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 IGLC1P0CG04 106 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 ZNF182P17025 639 aaPredicted RBP5.32□□□□□ -1.56
VAT1-209ENST00000592388 NPPCP23582 126 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 CRYBB3P26998 211 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 RND2P52198 227 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 TAS2R19P59542 299 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 DEFA1P59665 94 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 DEFA3P59666 94 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 USF2Q15853 346 aaPredicted RBP5.32□□□□□ -1.56
VAT1-209ENST00000592388 ACTL10Q5JWF8 245 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 STEAP1BQ6NZ63 245 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 MZT2AQ6P582 158 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 Q6ZTC4 211 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 TMEM229BQ8NBD8 167 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 SVIPQ8NHG7 77 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 AP3S1Q92572 193 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 TMEM230Q96A57 120 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 ZNF503Q96F45 646 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 RRNAD1Q96FB5 475 aaKnown RBP5.32□□□□□ -1.56
VAT1-209ENST00000592388 RTBDNQ9BSG5 229 aaPredicted RBP5.32□□□□□ -1.56
VAT1-209ENST00000592388 TMEM231Q9H6L2 316 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 NAA60Q9H7X0 242 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 ENY2Q9NPA8 101 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 MDFICQ9P1T7 246 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 CELA1Q9UNI1 258 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 X6R8D5 127 aa5.32□□□□□ -1.56
VAT1-209ENST00000592388 VPS13BQ7Z7G8 4022 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 ELOA3CA0A087WX78 387 aaPredicted RBP5.31□□□□□ -1.56
VAT1-209ENST00000592388 TRAV2A0A0B4J234 112 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 CTDSP2O14595 271 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 RGS5O15539 181 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 TBPP20226 339 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 SUB1P53999 127 aaKnown RBP eCLIP5.31□□□□□ -1.562e-8■■■■□ 26.6
VAT1-209ENST00000592388 CMC4P56277 68 aaPredicted RBP5.31□□□□□ -1.56
VAT1-209ENST00000592388 DEFB1P60022 68 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 SPCS3P61009 180 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 POLR2GP62487 172 aaKnown RBP eCLIP5.31□□□□□ -1.56
VAT1-209ENST00000592388 PSMG4Q5JS54 123 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 TMEM268Q5VZI3 342 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 PRSS54Q6PEW0 395 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 UBE2DNLQ8IWF7 75 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 SELENOHQ8IZQ5 122 aaKnown RBP5.31□□□□□ -1.56
VAT1-209ENST00000592388 SLC24A4Q8NFF2 622 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 OR4C16Q8NGL9 310 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 TERB2Q8NHR7 220 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 ZFAND1Q8TCF1 268 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 GLYATL2Q8WU03 294 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 GLMPQ8WWB7 406 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 FRZBQ92765 325 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 RBPMSQ93062 196 aaKnown RBP5.31□□□□□ -1.56
VAT1-209ENST00000592388 GPR146Q96CH1 333 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 SCRT1Q9BWW7 348 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 TMEM222Q9H0R3 208 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 CCDC59Q9P031 241 aaKnown RBP5.31□□□□□ -1.56
VAT1-209ENST00000592388 PLA2G2DQ9UNK4 145 aa5.31□□□□□ -1.56
VAT1-209ENST00000592388 C14orf166Q9Y224 244 aaKnown RBP5.31□□□□□ -1.56
VAT1-209ENST00000592388 TRAV10A0A0B4J240 114 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 TEX13DA0A0J9YY54 714 aaPredicted RBP5.3□□□□□ -1.56
VAT1-209ENST00000592388 A0A1W2PS18 150 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 CRYM-AS1A6NIL9 109 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 CEBPZOSA8MTT3 80 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 ZNF705EA8MWA4 302 aaPredicted RBP5.3□□□□□ -1.56
VAT1-209ENST00000592388 GABARAPH6UMI1 98 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 ATG12O94817 140 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 CDS2O95674 445 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 IL4P05112 153 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 CD5P06127 495 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 HLA-DMBP28068 263 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 OR10J1P30954 320 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 DHODHQ02127 395 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 DHRS2Q13268 280 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 ZFP69Q49AA0 526 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 AARDQ4LEZ3 155 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 LINC00518Q8N0U6 118 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.3□□□□□ -1.56
VAT1-209ENST00000592388 CSNK1G2-AS1Q8NCQ2 148 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 OR1S2Q8NGQ3 325 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 SMIM4Q8WVI0 70 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 ACY3Q96HD9 319 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 GRAMD2BQ96HH9 432 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 RNF126Q9BV68 326 aa5.3□□□□□ -1.56
VAT1-209ENST00000592388 HEYLQ9NQ87 328 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms