RNA–Protein interactions for RNA: ENST00000592138.5

TPM4-215, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-215ENST00000592138 EDN2P20800 178 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 NPPCP23582 126 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 NUP62P37198 522 aaPredicted RBP7.34□□□□□ -1.23
TPM4-215ENST00000592138 HBG1P69891 147 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 HBG2P69892 147 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 AKR1C1Q04828 323 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 VWC2Q2TAL6 325 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 CD300EQ496F6 205 aaPredicted RBP7.34□□□□□ -1.23
TPM4-215ENST00000592138 LRRC37A5PQ49AS3 106 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 BTNL8Q6UX41 500 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 HAPLN4Q86UW8 402 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 OR11H7Q8NGC8 314 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 METTL26Q96S19 204 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 SLC25A31Q9H0C2 315 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 TMEM231Q9H6L2 316 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 VSIRQ9H7M9 311 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 NOTCH3Q9UM47 2321 aa7.34□□□□□ -1.23
TPM4-215ENST00000592138 IGSF23A1L1A6 192 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 FAM24AA6NFZ4 105 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 H0YIZ8 118 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 TSPAN4O14817 238 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 CCNKO75909 580 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 IL4P05112 153 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 GIPP09681 153 aaPredicted RBP7.33□□□□□ -1.24
TPM4-215ENST00000592138 SELENOTP62341 195 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 ZNF90Q03938 601 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 FGL1Q08830 312 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 SLC38A11Q08AI6 406 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 ARL16Q0P5N6 197 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 FCN2Q15485 313 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 ATP6V1FQ16864 119 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 LAMTOR1Q6IAA8 161 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 TMEM61Q8N0U2 210 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 RNF125Q96EQ8 232 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 NARS2Q96I59 477 aaKnown RBP7.33□□□□□ -1.24
TPM4-215ENST00000592138 SPAG8Q99932 426 aaPredicted RBP7.33□□□□□ -1.24
TPM4-215ENST00000592138 RHPN1-AS1Q9BWJ2 59 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 OR5AC2Q9NZP5 309 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 PFDN2Q9UHV9 154 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 SLC45A2Q9UMX9 530 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 LSM4Q9Y4Z0 139 aaKnown RBP7.33□□□□□ -1.24
TPM4-215ENST00000592138 U3KQE9 123 aa7.33□□□□□ -1.24
TPM4-215ENST00000592138 IGHV3OR16-8A0A075B7F1 116 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 SMCO3A2RU48 225 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 ZNF785A8K8V0 405 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 ZNF207O43670 478 aaKnown RBP7.32□□□□□ -1.24
TPM4-215ENST00000592138 CST7O76096 145 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 HNRNPCP07910 306 aaKnown RBP eCLIP7.32□□□□□ -1.24
TPM4-215ENST00000592138 S100A7P31151 101 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 PLP1P60201 277 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 RAP2BP61225 183 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 EWSR1Q01844 656 aaKnown RBP eCLIP7.32□□□□□ -1.24
TPM4-215ENST00000592138 USF2Q15853 346 aaPredicted RBP7.32□□□□□ -1.24
TPM4-215ENST00000592138 FAM90A2PQ658T7 463 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 RBPMS2Q6ZRY4 209 aaKnown RBP7.32□□□□□ -1.24
TPM4-215ENST00000592138 LILRB2Q8N423 598 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 BPIFCQ8NFQ6 507 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 CHAC2Q8WUX2 184 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 WDR89Q96FK6 387 aaPredicted RBP7.32□□□□□ -1.24
TPM4-215ENST00000592138 RNF126Q9BV68 326 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 TMEM147Q9BVK8 224 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 UQCC1Q9NVA1 299 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 RABAC1Q9UI14 185 aa7.32□□□□□ -1.24
TPM4-215ENST00000592138 TRAV2A0A0B4J234 112 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 IZUMO1RA6ND01 250 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 K7EIL1 84 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 MPDU1O75352 247 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 EIF2B2P49770 351 aaKnown RBP7.31□□□□□ -1.24
TPM4-215ENST00000592138 PXDC1Q5TGL8 231 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 CYP2G1PQ6ZSU1 146 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 ZNF546Q86UE3 836 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 GTSCR1Q86UQ5 136 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 TMEM217Q8N7C4 229 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 THAP6Q8TBB0 222 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 ST8SIA2Q92186 375 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 GRAMD2BQ96HH9 432 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 PRR25Q96S07 402 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 RNF2Q99496 336 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 FAM110AQ9BQ89 295 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 MBD2Q9UBB5 411 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 WDR83OSQ9Y284 106 aa7.31□□□□□ -1.24
TPM4-215ENST00000592138 A8MZ25 164 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 BUB3O43684 328 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 APOHP02749 345 aaPredicted RBP7.3□□□□□ -1.24
TPM4-215ENST00000592138 PRB2P02812 416 aaPredicted RBP7.3□□□□□ -1.24
TPM4-215ENST00000592138 AP2S1P53680 142 aaPredicted RBP7.3□□□□□ -1.24
TPM4-215ENST00000592138 LYZP61626 148 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 RAB31Q13636 194 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 C1orf194Q5T5A4 169 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 C16orf54Q6UWD8 224 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 S100A7AQ86SG5 101 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 Q8N1Y9 231 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 OR5C1Q8NGR4 320 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 MRAPQ8TCY5 172 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 HSPB11Q9Y547 144 aa7.3□□□□□ -1.24
TPM4-215ENST00000592138 HELTA6NFD8 242 aa7.29□□□□□ -1.24
TPM4-215ENST00000592138 OR4C46A6NHA9 309 aa7.29□□□□□ -1.24
TPM4-215ENST00000592138 AGPAT2O15120 278 aa7.29□□□□□ -1.24
TPM4-215ENST00000592138 RPL12P30050 165 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms