RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 TP53TG1Q9Y2A0 90 aa20.11■□□□□ 0.81
SMAD4-213ENST00000591914 TCRBP04435 133 aa20.1■□□□□ 0.81
SMAD4-213ENST00000591914 RPL35AP18077 110 aaKnown RBP20.1■□□□□ 0.81
SMAD4-213ENST00000591914 FAM24BQ8N5W8 94 aa20.1■□□□□ 0.81
SMAD4-213ENST00000591914 STPG3Q8N7X2 389 aa20.1■□□□□ 0.81
SMAD4-213ENST00000591914 STXBP6Q8NFX7 210 aa20.1■□□□□ 0.81
SMAD4-213ENST00000591914 OR51G1Q8NGK1 321 aa20.1■□□□□ 0.81
SMAD4-213ENST00000591914 RABAC1Q9UI14 185 aa20.1■□□□□ 0.81
SMAD4-213ENST00000591914 K7EQG2 157 aa20.09■□□□□ 0.81
SMAD4-213ENST00000591914 ZNF90Q03938 601 aa20.09■□□□□ 0.81
SMAD4-213ENST00000591914 RNF125Q96EQ8 232 aa20.09■□□□□ 0.81
SMAD4-213ENST00000591914 HELTA6NFD8 242 aa20.08■□□□□ 0.81
SMAD4-213ENST00000591914 NKX2-1P43699 371 aaPredicted RBP20.08■□□□□ 0.81
SMAD4-213ENST00000591914 EIF2B2P49770 351 aaKnown RBP20.08■□□□□ 0.81
SMAD4-213ENST00000591914 POLR2GP62487 172 aaKnown RBP eCLIP20.08■□□□□ 0.81
SMAD4-213ENST00000591914 SPANXN5Q5MJ07 72 aa20.08■□□□□ 0.81
SMAD4-213ENST00000591914 DCANP1Q8TF63 244 aa20.08■□□□□ 0.81
SMAD4-213ENST00000591914 S100ZQ8WXG8 99 aa20.08■□□□□ 0.81
SMAD4-213ENST00000591914 IGKV1OR2-108A0A075B7D4 117 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 H3BP45 60 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 BUB3O43684 328 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 DEFB131AP59861 70 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 DEFB135Q30KP9 77 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 THAP8Q8NA92 274 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 TRGV9Q99603 122 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 NUDT15Q9NV35 164 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 STRAPQ9Y3F4 350 aaKnown RBP20.07■□□□□ 0.8
SMAD4-213ENST00000591914 STARD9Q9P2P6 4700 aa20.07■□□□□ 0.8
SMAD4-213ENST00000591914 FABP1P07148 127 aa20.06■□□□□ 0.8
SMAD4-213ENST00000591914 AP2S1P53680 142 aaPredicted RBP20.06■□□□□ 0.8
SMAD4-213ENST00000591914 IAH1Q2TAA2 248 aaPredicted RBP20.06■□□□□ 0.8
SMAD4-213ENST00000591914 ZFAND6Q6FIF0 208 aa20.06■□□□□ 0.8
SMAD4-213ENST00000591914 OR8G2PQ6IF36 304 aa20.06■□□□□ 0.8
SMAD4-213ENST00000591914 TRAV6A0A075B6T7 132 aa20.05■□□□□ 0.8
SMAD4-213ENST00000591914 SPRY2O43597 315 aa20.05■□□□□ 0.8
SMAD4-213ENST00000591914 LEMD1Q68G75 181 aa20.05■□□□□ 0.8
SMAD4-213ENST00000591914 RNF183Q96D59 192 aa20.05■□□□□ 0.8
SMAD4-213ENST00000591914 RYR3Q15413 4870 aa20.04■□□□□ 0.8
SMAD4-213ENST00000591914 SSSCA1O60232 199 aa20.04■□□□□ 0.8
SMAD4-213ENST00000591914 SMIM8Q96KF7 97 aa20.04■□□□□ 0.8
SMAD4-213ENST00000591914 PBDC1Q9BVG4 233 aa20.04■□□□□ 0.8
SMAD4-213ENST00000591914 CSTL1Q9H114 145 aa20.04■□□□□ 0.8
SMAD4-213ENST00000591914 TBC1D24Q9ULP9 559 aa20.04■□□□□ 0.8
SMAD4-213ENST00000591914 NUP62P37198 522 aaPredicted RBP20.03■□□□□ 0.8
SMAD4-213ENST00000591914 ZBTB8BQ8NAP8 495 aaPredicted RBP20.03■□□□□ 0.8
SMAD4-213ENST00000591914 PSENENQ9NZ42 101 aa20.03■□□□□ 0.8
SMAD4-213ENST00000591914 PTTG2Q9NZH5 202 aa20.03■□□□□ 0.8
SMAD4-213ENST00000591914 SNRPGP15A8MWD9 76 aa20.02■□□□□ 0.8
SMAD4-213ENST00000591914 ZNF688P0C7X2 276 aa20.02■□□□□ 0.8
SMAD4-213ENST00000591914 PAX9P55771 341 aa20.02■□□□□ 0.8
SMAD4-213ENST00000591914 SIGLEC15Q6ZMC9 328 aa20.02■□□□□ 0.8
SMAD4-213ENST00000591914 IL17DQ8TAD2 202 aa20.02■□□□□ 0.8
SMAD4-213ENST00000591914 PFDN2Q9UHV9 154 aa20.02■□□□□ 0.8
SMAD4-213ENST00000591914 LYZP61626 148 aa20.01■□□□□ 0.79
SMAD4-213ENST00000591914 ASAH1Q13510 395 aa20.01■□□□□ 0.79
SMAD4-213ENST00000591914 OR2F1Q13607 317 aa20.01■□□□□ 0.79
SMAD4-213ENST00000591914 ACOT7LQ6ZUV0 252 aa20.01■□□□□ 0.79
SMAD4-213ENST00000591914 ZNF431Q8TF32 576 aaPredicted RBP20.01■□□□□ 0.79
SMAD4-213ENST00000591914 FAM240BA0A1B0GVZ2 78 aa20■□□□□ 0.79
SMAD4-213ENST00000591914 PMS2P5A8MQ11 134 aa20■□□□□ 0.79
SMAD4-213ENST00000591914 H2AFB2P0C5Z0 115 aa20■□□□□ 0.79
SMAD4-213ENST00000591914 RAB40CQ96S21 281 aa20■□□□□ 0.79
SMAD4-213ENST00000591914 SEC22CQ9BRL7 303 aa20■□□□□ 0.79
SMAD4-213ENST00000591914 NRN1Q9NPD7 142 aa20■□□□□ 0.79
SMAD4-213ENST00000591914 GSKIPQ9P0R6 139 aa20■□□□□ 0.79
SMAD4-213ENST00000591914 SCGB1D2O95969 90 aa19.99■□□□□ 0.79
SMAD4-213ENST00000591914 CFDP00746 253 aaPredicted RBP19.99■□□□□ 0.79
SMAD4-213ENST00000591914 TAS2R30P59541 319 aa19.99■□□□□ 0.79
SMAD4-213ENST00000591914 MZT2BQ6NZ67 158 aa19.99■□□□□ 0.79
SMAD4-213ENST00000591914 TMEM14EPQ6UXP3 125 aa19.99■□□□□ 0.79
SMAD4-213ENST00000591914 WDR12Q9GZL7 423 aaKnown RBP19.99■□□□□ 0.79
SMAD4-213ENST00000591914 RCL1Q9Y2P8 373 aaKnown RBP19.99■□□□□ 0.79
SMAD4-213ENST00000591914 CCSO14618 274 aa19.98■□□□□ 0.79
SMAD4-213ENST00000591914 AKR1C1Q04828 323 aa19.98■□□□□ 0.79
SMAD4-213ENST00000591914 C1orf194Q5T5A4 169 aa19.98■□□□□ 0.79
SMAD4-213ENST00000591914 TMEM144Q7Z5S9 345 aa19.98■□□□□ 0.79
SMAD4-213ENST00000591914 STHQ8IWL8 128 aa19.98■□□□□ 0.79
SMAD4-213ENST00000591914 SEPSECSQ9HD40 501 aaKnown RBP19.98■□□□□ 0.79
SMAD4-213ENST00000591914 DYNC2H1Q8NCM8 4307 aaKnown RBP19.98■□□□□ 0.79
SMAD4-213ENST00000591914 TENM2Q9NT68 2774 aa19.98■□□□□ 0.79
SMAD4-213ENST00000591914 MBPP02686 304 aaPredicted RBP19.97■□□□□ 0.79
SMAD4-213ENST00000591914 ZNF846Q147U1 533 aa19.97■□□□□ 0.79
SMAD4-213ENST00000591914 TRPT1Q86TN4 253 aaKnown RBP19.97■□□□□ 0.79
SMAD4-213ENST00000591914 GATAD1Q8WUU5 269 aa19.97■□□□□ 0.79
SMAD4-213ENST00000591914 A0A0J9YWU9 116 aa19.96■□□□□ 0.79
SMAD4-213ENST00000591914 TSC22D2O75157 780 aa19.96■□□□□ 0.79
SMAD4-213ENST00000591914 UPK1BO75841 260 aa19.96■□□□□ 0.79
SMAD4-213ENST00000591914 FBXL17Q9UF56 701 aa19.96■□□□□ 0.79
SMAD4-213ENST00000591914 CCNKO75909 580 aa19.95■□□□□ 0.78
SMAD4-213ENST00000591914 CA1P00915 261 aaPredicted RBP19.95■□□□□ 0.78
SMAD4-213ENST00000591914 METTL15P1P0C7V9 234 aa19.95■□□□□ 0.78
SMAD4-213ENST00000591914 SNRPD3P62318 126 aaKnown RBP19.95■□□□□ 0.78
SMAD4-213ENST00000591914 PSMG4Q5JS54 123 aa19.95■□□□□ 0.78
SMAD4-213ENST00000591914 C12orf45Q8N5I9 185 aaPredicted RBP19.95■□□□□ 0.78
SMAD4-213ENST00000591914 SLC45A2Q9UMX9 530 aa19.95■□□□□ 0.78
SMAD4-213ENST00000591914 C7orf66A4D0T2 115 aa19.94■□□□□ 0.78
SMAD4-213ENST00000591914 KNCNA6PVL3 124 aa19.94■□□□□ 0.78
SMAD4-213ENST00000591914 DLK1P80370 383 aa19.94■□□□□ 0.78
SMAD4-213ENST00000591914 TMEM182Q6ZP80 229 aaPredicted RBP19.94■□□□□ 0.78
SMAD4-213ENST00000591914 BPIFCQ8NFQ6 507 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms