RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 GLMPQ8WWB7 406 aa16.52■□□□□ 0.24
MBD3-208ENST00000590830 TRAV2A0A0B4J234 112 aa16.51■□□□□ 0.23
MBD3-208ENST00000590830 ZFP92A6NM28 416 aa16.51■□□□□ 0.23
MBD3-208ENST00000590830 DNASE2O00115 360 aaPredicted RBP16.51■□□□□ 0.23
MBD3-208ENST00000590830 RPL35AP18077 110 aaKnown RBP16.51■□□□□ 0.23
MBD3-208ENST00000590830 CMC4P56277 68 aaPredicted RBP16.51■□□□□ 0.23
MBD3-208ENST00000590830 RPP30P78346 268 aaKnown RBP16.51■□□□□ 0.23
MBD3-208ENST00000590830 ASAH1Q13510 395 aa16.51■□□□□ 0.23
MBD3-208ENST00000590830 ZNF846Q147U1 533 aa16.51■□□□□ 0.23
MBD3-208ENST00000590830 THAP8Q8NA92 274 aa16.51■□□□□ 0.23
MBD3-208ENST00000590830 ZNF431Q8TF32 576 aaPredicted RBP16.51■□□□□ 0.23
MBD3-208ENST00000590830 OVOL2Q9BRP0 275 aa16.51■□□□□ 0.23
MBD3-208ENST00000590830 STRAPQ9Y3F4 350 aaKnown RBP16.51■□□□□ 0.23
MBD3-208ENST00000590830 FAM240BA0A1B0GVZ2 78 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 PMS2P5A8MQ11 134 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 C3orf84H3BNL1 204 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 CCSO14618 274 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 SSSCA1O60232 199 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 UPK1BO75841 260 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 STPG3Q8N7X2 389 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 SMIM8Q96KF7 97 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 PSENENQ9NZ42 101 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 GSKIPQ9P0R6 139 aa16.5■□□□□ 0.23
MBD3-208ENST00000590830 K7EQG2 157 aa16.49■□□□□ 0.23
MBD3-208ENST00000590830 BUB3O43684 328 aa16.49■□□□□ 0.23
MBD3-208ENST00000590830 OR2F1Q13607 317 aa16.49■□□□□ 0.23
MBD3-208ENST00000590830 STXBP6Q8NFX7 210 aa16.49■□□□□ 0.23
MBD3-208ENST00000590830 RNF125Q96EQ8 232 aa16.49■□□□□ 0.23
MBD3-208ENST00000590830 GRAMD2BQ96HH9 432 aa16.49■□□□□ 0.23
MBD3-208ENST00000590830 NARS2Q96I59 477 aaKnown RBP16.49■□□□□ 0.23
MBD3-208ENST00000590830 TRGV9Q99603 122 aa16.49■□□□□ 0.23
MBD3-208ENST00000590830 WDR12Q9GZL7 423 aaKnown RBP16.49■□□□□ 0.23
MBD3-208ENST00000590830 RABAC1Q9UI14 185 aa16.49■□□□□ 0.23
MBD3-208ENST00000590830 CCNKO75909 580 aa16.48■□□□□ 0.23
MBD3-208ENST00000590830 MBPP02686 304 aaPredicted RBP16.48■□□□□ 0.23
MBD3-208ENST00000590830 DEFB131AP59861 70 aa16.48■□□□□ 0.23
MBD3-208ENST00000590830 MZT2BQ6NZ67 158 aa16.48■□□□□ 0.23
MBD3-208ENST00000590830 DCANP1Q8TF63 244 aa16.48■□□□□ 0.23
MBD3-208ENST00000590830 RCL1Q9Y2P8 373 aaKnown RBP16.48■□□□□ 0.23
MBD3-208ENST00000590830 KIR2DL5BA0A0G2JN68 375 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 KIR2DL5BA0A0G2JPC4 375 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 SCGB1D2O95969 90 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 APOC4P55056 127 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 LEMD1Q68G75 181 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 TMEM182Q6ZP80 229 aaPredicted RBP16.47■□□□□ 0.23
MBD3-208ENST00000590830 KIR2DL5AQ8N109 375 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 C12orf45Q8N5I9 185 aaPredicted RBP16.47■□□□□ 0.23
MBD3-208ENST00000590830 KIR2DL5BQ8NHK3 375 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 PBDC1Q9BVG4 233 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 BATF3Q9NR55 127 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 STARD9Q9P2P6 4700 aa16.47■□□□□ 0.23
MBD3-208ENST00000590830 EIF2B2P49770 351 aaKnown RBP16.46■□□□□ 0.23
MBD3-208ENST00000590830 CASC10Q5T4H9 136 aa16.46■□□□□ 0.23
MBD3-208ENST00000590830 TMEM14EPQ6UXP3 125 aa16.46■□□□□ 0.23
MBD3-208ENST00000590830 ACOT7LQ6ZUV0 252 aa16.46■□□□□ 0.23
MBD3-208ENST00000590830 CSMD3Q7Z407 3707 aa16.46■□□□□ 0.23
MBD3-208ENST00000590830 HELTA6NFD8 242 aa16.45■□□□□ 0.22
MBD3-208ENST00000590830 SNRPGP15A8MWD9 76 aa16.45■□□□□ 0.22
MBD3-208ENST00000590830 Q6ZWC4 215 aa16.45■□□□□ 0.22
MBD3-208ENST00000590830 RAB40CQ96S21 281 aa16.45■□□□□ 0.22
MBD3-208ENST00000590830 UBE2CO00762 179 aa16.44■□□□□ 0.22
MBD3-208ENST00000590830 METTL15P1P0C7V9 234 aa16.44■□□□□ 0.22
MBD3-208ENST00000590830 LYL1P12980 280 aa16.44■□□□□ 0.22
MBD3-208ENST00000590830 GATA2P23769 480 aaPredicted RBP16.44■□□□□ 0.22
MBD3-208ENST00000590830 LYZP61626 148 aa16.44■□□□□ 0.22
MBD3-208ENST00000590830 OR8G2PQ6IF36 304 aa16.44■□□□□ 0.22
MBD3-208ENST00000590830 RYR3Q15413 4870 aa16.44■□□□□ 0.22
MBD3-208ENST00000590830 C7orf66A4D0T2 115 aa16.43■□□□□ 0.22
MBD3-208ENST00000590830 FAM25EA8MYX2 175 aa16.43■□□□□ 0.22
MBD3-208ENST00000590830 IL5P05113 134 aa16.43■□□□□ 0.22
MBD3-208ENST00000590830 FABP1P07148 127 aa16.43■□□□□ 0.22
MBD3-208ENST00000590830 ZNF688P0C7X2 276 aa16.43■□□□□ 0.22
MBD3-208ENST00000590830 TAS2R30P59541 319 aa16.43■□□□□ 0.22
MBD3-208ENST00000590830 ARL16Q0P5N6 197 aa16.43■□□□□ 0.22
MBD3-208ENST00000590830 DEFB135Q30KP9 77 aa16.43■□□□□ 0.22
MBD3-208ENST00000590830 SPRY2O43597 315 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 TSC22D2O75157 780 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 AP2S1P53680 142 aaPredicted RBP16.42■□□□□ 0.22
MBD3-208ENST00000590830 ZFAND6Q6FIF0 208 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 SIGLEC15Q6ZMC9 328 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 TMEM144Q7Z5S9 345 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 NRARPQ7Z6K4 114 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 RNF183Q96D59 192 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 CSTL1Q9H114 145 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 C11orf1Q9H5F2 150 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 TP53TG1Q9Y2A0 90 aa16.42■□□□□ 0.22
MBD3-208ENST00000590830 DYNC2H1Q8NCM8 4307 aaKnown RBP16.42■□□□□ 0.22
MBD3-208ENST00000590830 C5orf51A6NDU8 294 aa16.41■□□□□ 0.22
MBD3-208ENST00000590830 RRAS2P62070 204 aaPredicted RBP16.41■□□□□ 0.22
MBD3-208ENST00000590830 AKR1C1Q04828 323 aa16.41■□□□□ 0.22
MBD3-208ENST00000590830 IL15RAQ13261 267 aa16.41■□□□□ 0.22
MBD3-208ENST00000590830 GSG1LQ6UXU4 331 aa16.41■□□□□ 0.22
MBD3-208ENST00000590830 ENKURQ8TC29 256 aa16.41■□□□□ 0.22
MBD3-208ENST00000590830 C2orf50Q96LR7 162 aa16.41■□□□□ 0.22
MBD3-208ENST00000590830 KNCNA6PVL3 124 aa16.4■□□□□ 0.22
MBD3-208ENST00000590830 K7EPK0 472 aa16.4■□□□□ 0.22
MBD3-208ENST00000590830 NRN1Q9NPD7 142 aa16.4■□□□□ 0.22
MBD3-208ENST00000590830 LSM5Q9Y4Y9 91 aaKnown RBP16.4■□□□□ 0.22
MBD3-208ENST00000590830 SMCO3A2RU48 225 aa16.39■□□□□ 0.21
MBD3-208ENST00000590830 DLK1P80370 383 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms