RNA–Protein interactions for RNA: ENST00000590266.5

SCAMP4-212, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-212ENST00000590266 VSIRQ9H7M9 311 aa10.47□□□□□ -0.73
SCAMP4-212ENST00000590266 LSM5Q9Y4Y9 91 aaKnown RBP10.47□□□□□ -0.73
SCAMP4-212ENST00000590266 MBPP02686 304 aaPredicted RBP10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 LYZP61626 148 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 RRAS2P62070 204 aaPredicted RBP10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 ODF3L2Q3SX64 289 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 FAM90A2PQ658T7 463 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 ACOT7LQ6ZUV0 252 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 NRARPQ7Z6K4 114 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 APRG1Q8IVJ8 170 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 CITED4Q96RK1 184 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 FAM110AQ9BQ89 295 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 SPATA25Q9BR10 227 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 MS4A6AQ9H2W1 248 aa10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 RCL1Q9Y2P8 373 aaKnown RBP10.46□□□□□ -0.73
SCAMP4-212ENST00000590266 COL7A1Q02388 2944 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 NBEAL2Q6ZNJ1 2754 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 IGKV1D-37A0A075B6S9 117 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 LOC102724200A0A096LPH7 203 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 L7N2F9 121 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 CCNKO75909 580 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 PTTG1O95997 202 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 CD5P06127 495 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 FABP1P07148 127 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 METTL15P1P0C7V9 234 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 S100A10P60903 97 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 VAMP2P63027 116 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 ZNF124Q15973 351 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 RGS21Q2M5E4 152 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 RNF125Q96EQ8 232 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 SMIM8Q96KF7 97 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 GGTLC1Q9BX51 225 aa10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 GPN1Q9HCN4 374 aaPredicted RBP10.45□□□□□ -0.74
SCAMP4-212ENST00000590266 TENM3Q9P273 2699 aa10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 PRSS46E5RG02 174 aa10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 RPL35AP18077 110 aaKnown RBP10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 BCAP31P51572 246 aa10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 PAX9P55771 341 aa10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 GSG1LQ6UXU4 331 aa10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 LINC00322Q6ZN03 302 aaPredicted RBP10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 PPP1R14BQ96C90 147 aa10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
SCAMP4-212ENST00000590266 DNAH9Q9NYC9 4486 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 IGKV1OR2-108A0A075B7D4 117 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 C7orf66A4D0T2 115 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 SNRPGP15A8MWD9 76 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 INMT-MINDY4F8WBC2 141 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 IL5P05113 134 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 EIF2B2P49770 351 aaKnown RBP10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 FAM24BQ8N5W8 94 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 C2orf50Q96LR7 162 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 TRGV9Q99603 122 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 MAP6D1Q9H9H5 199 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 SORL1Q92673 2214 aa10.43□□□□□ -0.74
SCAMP4-212ENST00000590266 HELTA6NFD8 242 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 K7EPK0 472 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 GOSR2O14653 212 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 SIX6O95475 246 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 GATA2P23769 480 aaPredicted RBP10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 CAV2P51636 162 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 DEFB131AP59861 70 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 LEMD1Q68G75 181 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 C16orf54Q6UWD8 224 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 THAP8Q8NA92 274 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 OR10P1Q8NGE3 313 aa10.42□□□□□ -0.74
SCAMP4-212ENST00000590266 TSC22D2O75157 780 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 ZNF688P0C7X2 276 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 CMC4P56277 68 aaPredicted RBP10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 TAS2R30P59541 319 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 OXA1LQ15070 435 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 TMEM14EPQ6UXP3 125 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 SIGLEC15Q6ZMC9 328 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 GLMPQ8WWB7 406 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 MGAT4CQ9UBM8 478 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 PFDN2Q9UHV9 154 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 U3KQE9 123 aa10.41□□□□□ -0.74
SCAMP4-212ENST00000590266 PMS2P5A8MQ11 134 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 BUB3O43684 328 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 PRAF2O60831 178 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 ORM2P19652 201 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 PVALBP20472 110 aaPredicted RBP10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 APOC4P55056 127 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 DLK1P80370 383 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 RAB32Q13637 225 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 BPIFCQ8NFQ6 507 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 OR1B1Q8NGR6 318 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 MARVELD1Q9BSK0 173 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 DOK5Q9P104 306 aa10.4□□□□□ -0.74
SCAMP4-212ENST00000590266 TRAV2A0A0B4J234 112 aa10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 FAM24AA6NFZ4 105 aa10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 K7EQG2 157 aa10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 SSNA1O43805 119 aa10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 CST7O76096 145 aa10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 NUP62P37198 522 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 AP2S1P53680 142 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 ARL16Q0P5N6 197 aa10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 LRRC37A5PQ49AS3 106 aa10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 TMEM182Q6ZP80 229 aaPredicted RBP10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 CYP2G1PQ6ZSU1 146 aa10.39□□□□□ -0.75
SCAMP4-212ENST00000590266 TMEM144Q7Z5S9 345 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms