RNA–Protein interactions for RNA: ENST00000589937.5

RFX1-207, Transcript of regulatory factor X1, humanhuman

TSL 4

Gene RFX1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-207ENST00000589937 PRR20EP86478 221 aa9.18□□□□□ -0.94
RFX1-207ENST00000589937 PRR20CP86479 221 aa9.18□□□□□ -0.94
RFX1-207ENST00000589937 PRR20DP86480 221 aa9.18□□□□□ -0.94
RFX1-207ENST00000589937 PRR20BP86481 221 aa9.18□□□□□ -0.94
RFX1-207ENST00000589937 PRR20AP86496 221 aa9.18□□□□□ -0.94
RFX1-207ENST00000589937 OR1S1Q8NH92 325 aa9.18□□□□□ -0.94
RFX1-207ENST00000589937 RABL2AQ9UBK7 228 aaPredicted RBP9.18□□□□□ -0.94
RFX1-207ENST00000589937 CELA1Q9UNI1 258 aa9.18□□□□□ -0.94
RFX1-207ENST00000589937 RABL2BQ9UNT1 228 aa9.18□□□□□ -0.94
RFX1-207ENST00000589937 ELOA3CA0A087WX78 387 aaPredicted RBP9.17□□□□□ -0.94
RFX1-207ENST00000589937 BUB3O43684 328 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 IFNA4P05014 189 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 VAMP1P23763 118 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 PPP1R1AQ13522 171 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 OR2F1Q13607 317 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 GAMTQ14353 236 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 GDF5OSQ5U4N7 250 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 SIGLEC15Q6ZMC9 328 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 ZNF767PQ75MW2 155 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 CSNK1G2-AS1Q8NCQ2 148 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 RNF125Q96EQ8 232 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 RAB40CQ96S21 281 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 WDR12Q9GZL7 423 aaKnown RBP9.17□□□□□ -0.94
RFX1-207ENST00000589937 MAGT1Q9H0U3 335 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 RBM38Q9H0Z9 239 aaKnown RBP9.17□□□□□ -0.94
RFX1-207ENST00000589937 KCNIP3Q9Y2W7 256 aa9.17□□□□□ -0.94
RFX1-207ENST00000589937 IGKV1OR2-108A0A075B7D4 117 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 PITX3O75364 302 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 SPP1P10451 314 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 FXYD7P58549 80 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 LYZP61626 148 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 ETFRF1Q6IPR1 90 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 Q6ZTC4 211 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 SCRT1Q9BWW7 348 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 NRN1Q9NPD7 142 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 XCL2Q9UBD3 114 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 PAIP2BQ9ULR5 123 aaKnown RBP9.16□□□□□ -0.94
RFX1-207ENST00000589937 U3KQ87 197 aa9.16□□□□□ -0.94
RFX1-207ENST00000589937 CCDC160A6NGH7 325 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 ZFP92A6NM28 416 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 ZNF705EA8MWA4 302 aaPredicted RBP9.15□□□□□ -0.94
RFX1-207ENST00000589937 H3BP45 60 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 IGKV3-20P01619 116 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 ANXA3P12429 323 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 HLA-DMBP28068 263 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 EIF2B2P49770 351 aaKnown RBP9.15□□□□□ -0.94
RFX1-207ENST00000589937 SRPXP78539 464 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 MORN3Q6PF18 240 aaPredicted RBP9.15□□□□□ -0.94
RFX1-207ENST00000589937 CCDC190Q86UF4 302 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 TOMM5Q8N4H5 51 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 SLC35E1Q96K37 410 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 SCGB3A2Q96PL1 93 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 MFFQ9GZY8 342 aa9.15□□□□□ -0.94
RFX1-207ENST00000589937 PRSS46E5RG02 174 aa9.14□□□□□ -0.95
RFX1-207ENST00000589937 H3BMM0 161 aa9.14□□□□□ -0.95
RFX1-207ENST00000589937 HOXB5P09067 269 aa9.14□□□□□ -0.95
RFX1-207ENST00000589937 FAUP35544 74 aaKnown RBP9.14□□□□□ -0.95
RFX1-207ENST00000589937 TMEM128Q5BJH2 165 aa9.14□□□□□ -0.95
RFX1-207ENST00000589937 LGALS9CQ6DKI2 356 aa9.14□□□□□ -0.95
RFX1-207ENST00000589937 TBC1D24Q9ULP9 559 aa9.14□□□□□ -0.95
RFX1-207ENST00000589937 IGLL5B9A064 214 aa9.13□□□□□ -0.95
RFX1-207ENST00000589937 F6UB75 175 aa9.13□□□□□ -0.95
RFX1-207ENST00000589937 SOCS3O14543 225 aa9.13□□□□□ -0.95
RFX1-207ENST00000589937 SFT2D2O95562 160 aa9.13□□□□□ -0.95
RFX1-207ENST00000589937 MIFP14174 115 aa9.13□□□□□ -0.95
RFX1-207ENST00000589937 SNRPD3P62318 126 aaKnown RBP9.13□□□□□ -0.95
RFX1-207ENST00000589937 NOXA1Q86UR1 476 aa9.13□□□□□ -0.95
RFX1-207ENST00000589937 C2CD4CQ8TF44 421 aa9.13□□□□□ -0.95
RFX1-207ENST00000589937 SRRQ9GZT4 340 aa9.13□□□□□ -0.95
RFX1-207ENST00000589937 DUXBA0A1W2PPF3 345 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 WRBO00258 174 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 ADAP1O75689 374 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 HLA-DRB4P13762 266 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 GATA2P23769 480 aaPredicted RBP9.12□□□□□ -0.95
RFX1-207ENST00000589937 GPX4P36969 197 aaPredicted RBP9.12□□□□□ -0.95
RFX1-207ENST00000589937 AP3S2P59780 193 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 GGNBP1Q5YKI7 109 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 OR8G2PQ6IF36 304 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 TMEM182Q6ZP80 229 aaPredicted RBP9.12□□□□□ -0.95
RFX1-207ENST00000589937 CENPSQ8N2Z9 138 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 LRTM2Q8N967 370 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 THAP8Q8NA92 274 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 C20orf173Q96LM9 149 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 C17orf77Q96MU5 243 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 LINC00052Q96N35 136 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 FLVCR2Q9UPI3 526 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
RFX1-207ENST00000589937 LINC00854A0A1B0GVQ3 168 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 CCNKO75909 580 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 PRB4P10163 310 aaPredicted RBP9.11□□□□□ -0.95
RFX1-207ENST00000589937 AP2S1P53680 142 aaPredicted RBP9.11□□□□□ -0.95
RFX1-207ENST00000589937 BAK1Q16611 211 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 TMEM41BQ5BJD5 291 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 ACOT7LQ6ZUV0 252 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 ZNF709Q8N972 641 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 TRGV9Q99603 122 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 SLC35B3Q9H1N7 401 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 SLC25A32Q9H2D1 315 aa9.11□□□□□ -0.95
RFX1-207ENST00000589937 HRH4Q9H3N8 390 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms