RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 ZNF90Q03938 601 aa16.34■□□□□ 0.21
R3HDM4-204ENST00000589428 RAB31Q13636 194 aa16.34■□□□□ 0.21
R3HDM4-204ENST00000589428 FAM209BQ5JX69 171 aa16.34■□□□□ 0.21
R3HDM4-204ENST00000589428 PHYHIPLQ96FC7 376 aa16.34■□□□□ 0.21
R3HDM4-204ENST00000589428 TRGV9Q99603 122 aa16.34■□□□□ 0.21
R3HDM4-204ENST00000589428 PEF1Q9UBV8 284 aaKnown RBP16.34■□□□□ 0.21
R3HDM4-204ENST00000589428 SLC45A2Q9UMX9 530 aa16.34■□□□□ 0.21
R3HDM4-204ENST00000589428 TIMM9Q9Y5J7 89 aa16.34■□□□□ 0.21
R3HDM4-204ENST00000589428 TIGITQ495A1 244 aa16.33■□□□□ 0.21
R3HDM4-204ENST00000589428 CLEC19AQ6UXS0 136 aa16.33■□□□□ 0.21
R3HDM4-204ENST00000589428 TMEM182Q6ZP80 229 aaPredicted RBP16.33■□□□□ 0.21
R3HDM4-204ENST00000589428 ZNF709Q8N972 641 aa16.33■□□□□ 0.21
R3HDM4-204ENST00000589428 C17orf112F2Z3M2 114 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 CLEC3BP05452 202 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 CTSGP08311 255 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 SEC11BP0C7V7 166 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 GATA2P23769 480 aaPredicted RBP16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 ADMP35318 185 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 MIC13Q5XKP0 118 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 CYP2G1PQ6ZSU1 146 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 ZNF680Q8NEM1 530 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 WFDC9Q8NEX5 89 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 OR2G3Q8NGZ4 309 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 ATP6V0BQ99437 205 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 CHRDL1Q9BU40 450 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 PLA2G2EQ9NZK7 142 aa16.33■□□□□ 0.2
R3HDM4-204ENST00000589428 PRR20EP86478 221 aa16.32■□□□□ 0.2
R3HDM4-204ENST00000589428 PRR20CP86479 221 aa16.32■□□□□ 0.2
R3HDM4-204ENST00000589428 PRR20DP86480 221 aa16.32■□□□□ 0.2
R3HDM4-204ENST00000589428 PRR20BP86481 221 aa16.32■□□□□ 0.2
R3HDM4-204ENST00000589428 PRR20AP86496 221 aa16.32■□□□□ 0.2
R3HDM4-204ENST00000589428 STPG3Q8N7X2 389 aa16.32■□□□□ 0.2
R3HDM4-204ENST00000589428 PXMP4Q9Y6I8 212 aa16.32■□□□□ 0.2
R3HDM4-204ENST00000589428 TRAV30A0A087WSZ9 112 aa16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 TRBV12-3P01733 135 aa16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 ZP3P21754 424 aa16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 RPL29P47914 159 aaKnown RBP16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 FAM74A1Q5RGS3 127 aa16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 EIF5AL1Q6IS14 154 aaKnown RBP16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 BPIFCQ8NFQ6 507 aa16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 RCC1LQ96I51 464 aaKnown RBP16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 GAR1Q9NY12 217 aaKnown RBP16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 SLURP1P55000 103 aa16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 ELLP55199 621 aaPredicted RBP16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 KCNIP2Q9NS61 270 aa16.31■□□□□ 0.2
R3HDM4-204ENST00000589428 PPP5D1E7EU14 171 aa16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 TGOLN2O43493 480 aa16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 LINC00869P0C866 280 aa16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 HOXD3P31249 432 aaPredicted RBP16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 B2MP61769 119 aa16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 SELENOTP62341 195 aa16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 ZNF414Q96IQ9 312 aa16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 MCRIP2Q9BUT9 160 aaKnown RBP16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 SLC39A9Q9NUM3 307 aa16.3■□□□□ 0.2
R3HDM4-204ENST00000589428 NUPL2O15504 423 aaKnown RBP16.29■□□□□ 0.2
R3HDM4-204ENST00000589428 YIF1AO95070 293 aa16.29■□□□□ 0.2
R3HDM4-204ENST00000589428 IFNA7P01567 189 aa16.29■□□□□ 0.2
R3HDM4-204ENST00000589428 SERF2P84101 59 aa16.29■□□□□ 0.2
R3HDM4-204ENST00000589428 FFAR4Q5NUL3 377 aa16.29■□□□□ 0.2
R3HDM4-204ENST00000589428 SCGB2A1O75556 95 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 PSG1P11464 419 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 YPEL3P61236 119 aaPredicted RBP16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 RPEL1Q2QD12 228 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 SPSB3Q6PJ21 355 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 VSIRQ9H7M9 311 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 TOMM40O96008 361 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 IGLL1P15814 213 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 ARL3P36405 182 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 GCSAMLQ5JQS6 135 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 GPR61Q9BZJ8 451 aa16.28■□□□□ 0.2
R3HDM4-204ENST00000589428 OVOL1O14753 267 aa16.27■□□□□ 0.19
R3HDM4-204ENST00000589428 RD3LP0DJH9 198 aa16.27■□□□□ 0.19
R3HDM4-204ENST00000589428 RAB2AP61019 212 aa16.27■□□□□ 0.19
R3HDM4-204ENST00000589428 DLX4Q92988 240 aaPredicted RBP16.27■□□□□ 0.19
R3HDM4-204ENST00000589428 UBQLN2Q9UHD9 624 aa16.27■□□□□ 0.19
R3HDM4-204ENST00000589428 NBEAL1Q6ZS30 2694 aa16.27■□□□□ 0.19
R3HDM4-204ENST00000589428 IGHV3-35A0A0C4DH35 117 aa16.26■□□□□ 0.19
R3HDM4-204ENST00000589428 BMPR1BO00238 502 aa16.26■□□□□ 0.19
R3HDM4-204ENST00000589428 FABP1P07148 127 aa16.26■□□□□ 0.19
R3HDM4-204ENST00000589428 UMAD1C9J7I0 102 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 RGS13O14921 159 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 GGCTO75223 188 aaKnown RBP16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 SULT1A2P50226 295 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 AKR1C8PQ5T2L2 129 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 ZNF767PQ75MW2 155 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 RPRMQ9NS64 109 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 NOTCH3Q9UM47 2321 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 G3V4G9 280 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 FHITP49789 147 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 TMEM41BQ5BJD5 291 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 OXLD1Q5BKU9 147 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 SAMD5Q5TGI4 173 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 OR51G1Q8NGK1 321 aa16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 PUS1Q9Y606 427 aaKnown RBP eCLIP16.25■□□□□ 0.19
R3HDM4-204ENST00000589428 SEC14L6B5MCN3 397 aa16.24■□□□□ 0.19
R3HDM4-204ENST00000589428 M6PRP20645 277 aa16.24■□□□□ 0.19
R3HDM4-204ENST00000589428 ZNF600Q6ZNG1 722 aa16.24■□□□□ 0.19
R3HDM4-204ENST00000589428 Q6ZRG5 221 aa16.24■□□□□ 0.19
R3HDM4-204ENST00000589428 DOK5Q9P104 306 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms