RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 CLDN24A6NM45 220 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 PSMD12O00232 456 aaPredicted RBP0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 FAAHO00519 579 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 SDCBPO00560 298 aaPredicted RBP0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 GEMIN2O14893 280 aaKnown RBP0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 HLA-DRB1P01911 266 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 CD79AP11912 226 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 ITGB3BPQ13352 177 aaPredicted RBP0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 ZNF345Q14585 488 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 CDK10Q15131 360 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 AADACL3Q5VUY0 350 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 RPL22L1Q6P5R6 122 aaKnown RBP0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 CLDN22Q8N7P3 220 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 MNS1Q8NEH6 495 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 OR13C4Q8NGS5 318 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 PFN4Q8NHR9 129 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 RASSF5Q8WWW0 418 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 TSPAN32Q96QS1 320 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 MRPL57Q9BQC6 102 aaKnown RBP0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 C20orf27Q9GZN8 174 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 UCK1Q9HA47 277 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 FBXL12Q9NXK8 326 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 BAIAP2Q9UQB8 552 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 ABCA9Q8IUA7 1624 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 ARHGAP5Q13017 1502 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 EHBP1L1Q8N3D4 1523 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 PAPPA2Q9BXP8 1791 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 DISP2A7MBM2 1401 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 FGD6Q6ZV73 1430 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 EPPK1P58107 5090 aaKnown RBP0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 SAMD9LQ8IVG5 1584 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 PEG3Q9GZU2 1588 aa0.62□□□□□ -2.31
HMGN1P30-201ENST00000589286 VIRMAQ69YN4 1812 aaKnown RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 OTOGQ6ZRI0 2925 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HYDINQ4G0P3 5121 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 ABCA12Q86UK0 2595 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 SETD2Q9BYW2 2564 aaPredicted RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 UHRF1BP1LA0JNW5 1464 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 MARF1Q9Y4F3 1742 aaKnown RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 NAV2Q8IVL1 2488 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 FLNCQ14315 2725 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 TMEM131LA2VDJ0 1609 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 LRRC37A3O60309 1634 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 NUP155O75694 1391 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 PREX2Q70Z35 1606 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 CEP295Q9C0D2 2601 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 PTPN23Q9H3S7 1636 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 ZNF462Q96JM2 2506 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 SCN11AQ9UI33 1791 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 PRDM15P57071 1507 aaPredicted RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 ATP7AQ04656 1500 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 ZMYM4Q5VZL5 1548 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 ABCA10Q8WWZ4 1543 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 TULP4Q9NRJ4 1543 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 PQLC2LA1A4F0 135 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 OR4C46A6NHA9 309 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 TNNC2P02585 160 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 TTRP02766 147 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 METTL15P1P0C7V9 234 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 UBBP0CG47 229 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 RPS4Y1P22090 263 aaKnown RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST1H2BOP23527 126 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST1H2BBP33778 126 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 RPL5P46777 297 aaKnown RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 OMPP47874 163 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST1H2BDP58876 126 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 LSM6P62312 80 aaKnown RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST1H2BCP62807 126 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 RANP62826 216 aaKnown RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HBA1P69905 142 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 STX5Q13190 355 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST2H2BEQ16778 126 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 SPANXN3Q5MJ09 141 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 LPCAT3Q6P1A2 487 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 OR5B17Q8NGF7 314 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 C11orf40Q8WZ69 217 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST1H2BHQ93079 126 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 SERPINI1Q99574 410 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST1H2BNQ99877 126 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 HIST1H2BMQ99879 126 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 REG4Q9BYZ8 158 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 YIPF3Q9GZM5 350 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 PRTFDC1Q9NRG1 225 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 PKIGQ9Y2B9 76 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 TMEM56-RWDD3S4R434 201 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 SVEP1Q4LDE5 3571 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 MXRA5Q9NR99 2828 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 SETD5Q9C0A6 1442 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 TTC28Q96AY4 2481 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 IQGAP2Q13576 1575 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 ANK2Q01484 3957 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 PKD1L3Q7Z443 1732 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 PZPP20742 1482 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 MAGI2Q86UL8 1455 aa0.61□□□□□ -2.31
HMGN1P30-201ENST00000589286 DEPDC5O75140 1603 aa0.6□□□□□ -2.31
HMGN1P30-201ENST00000589286 PHRF1Q9P1Y6 1649 aaKnown RBP0.6□□□□□ -2.31
HMGN1P30-201ENST00000589286 MROH2AA6NES4 1674 aa0.6□□□□□ -2.31
HMGN1P30-201ENST00000589286 COL4A6Q14031 1691 aa0.6□□□□□ -2.31
HMGN1P30-201ENST00000589286 PIEZO1Q92508 2521 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms