RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 TEX38Q6PEX7 206 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 NECAP1Q8NC96 275 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 OR5AU1Q8NGC0 362 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 IGFBPL1Q8WX77 278 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BHQ93079 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 FAM167A-AS1Q96KT0 104 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 C12orf57Q99622 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BNQ99877 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIST1H2BMQ99879 126 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 PAXXQ9BUH6 204 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 ZNF355PQ9NSJ1 428 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 TBL2Q9Y4P3 447 aaKnown RBP7.93□□□□□ -1.14
VPS25-202ENST00000589219 HIVEP2P31629 2446 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 YLPM1P49750 1951 aaKnown RBP7.93□□□□□ -1.14
VPS25-202ENST00000589219 DOCK11Q5JSL3 2073 aa7.93□□□□□ -1.14
VPS25-202ENST00000589219 TRBV20OR9-2A0A075B6H5 130 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 A0A1W2PPQ1 181 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 GGTLC3B5MD39 225 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 PHOX2AO14813 284 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 CDX1P47902 265 aaPredicted RBP7.92□□□□□ -1.14
VPS25-202ENST00000589219 GNG4P50150 75 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 MFAP2P55001 183 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 SSBP2P81877 361 aaPredicted RBP7.92□□□□□ -1.14
VPS25-202ENST00000589219 FOXL1Q12952 345 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 KLRD1Q13241 179 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 VMO1Q7Z5L0 202 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 OR10G8Q8NGN5 311 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 EAF1Q96JC9 268 aaPredicted RBP7.92□□□□□ -1.14
VPS25-202ENST00000589219 ELOVL1Q9BW60 279 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 ZANQ9Y493 2812 aa7.92□□□□□ -1.14
VPS25-202ENST00000589219 FN1P02751 2386 aaKnown RBP7.91□□□□□ -1.14
VPS25-202ENST00000589219 TLN2Q9Y4G6 2542 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 IGHV2-70DA0A0C4DH43 119 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 HYPMO75409 117 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 CNIH1O95406 144 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 OR10J4P0C629 311 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 TRGC1P0CF51 173 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 CDKN1AP38936 164 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 NDUFA6P56556 154 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 TAS2R60P59551 318 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 ZNF90Q03938 601 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 PRB3Q04118 309 aaPredicted RBP7.91□□□□□ -1.14
VPS25-202ENST00000589219 TIGITQ495A1 244 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 CENPWQ5EE01 88 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 ACTL10Q5JWF8 245 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 LDLRAD2Q5SZI1 272 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 OR5T1Q8NG75 326 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 FRZBQ92765 325 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 SIRPDQ9H106 197 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 OR51M1Q9H341 326 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 MRPL36Q9P0J6 103 aaKnown RBP7.91□□□□□ -1.14
VPS25-202ENST00000589219 PITPNC1Q9UKF7 332 aa7.91□□□□□ -1.14
VPS25-202ENST00000589219 HELTA6NFD8 242 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 NPIPB5A8MRT5 1133 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 I3L2K1 104 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 OVOL3O00110 214 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 CRYBB3P26998 211 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 S100A2P29034 98 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 CNN1P51911 297 aaKnown RBP7.9□□□□□ -1.14
VPS25-202ENST00000589219 LGALS4P56470 323 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 S100A12P80511 92 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 RPL19P84098 196 aaKnown RBP7.9□□□□□ -1.14
VPS25-202ENST00000589219 EBI3Q14213 229 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 CLEC12BQ2HXU8 276 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 C5orf64Q2M2E5 130 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 PATE2Q6UY27 113 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 LINC00305Q7Z4B0 112 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 Q8N6K4 173 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 OCC1Q8TAD7 63 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 FXYD5Q96DB9 178 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 IGF2BP2-AS1Q96M15 143 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 IL36BQ9NZH7 164 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 CDC42EP3Q9UKI2 254 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 HILPDAQ9Y5L2 63 aa7.9□□□□□ -1.14
VPS25-202ENST00000589219 CSPG4Q6UVK1 2322 aa7.9□□□□□ -1.15
VPS25-202ENST00000589219 JMJD1CQ15652 2540 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 PGPEP1LA6NFU8 196 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 INAFM1C9JVW0 142 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 PEX7O00628 323 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 SCGB2A1O75556 95 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 IGLC1P0CG04 106 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 PDLIM4P50479 330 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 FXYD3Q14802 87 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 COA6Q5JTJ3 125 aaKnown RBP7.89□□□□□ -1.15
VPS25-202ENST00000589219 MORN5Q5VZ52 161 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 LHFPL4Q7Z7J7 247 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 S100A7AQ86SG5 101 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 ZNF329Q86UD4 541 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 OR1B1Q8NGR6 318 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 SGMS2Q8NHU3 365 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 ARPC1AQ92747 370 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 SMIM12Q96EX1 92 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 ZNF48Q96MX3 618 aaPredicted RBP7.89□□□□□ -1.15
VPS25-202ENST00000589219 WNT10AQ9GZT5 417 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 OSTCQ9NRP0 149 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 HIGD1AQ9Y241 93 aa7.89□□□□□ -1.15
VPS25-202ENST00000589219 TRAV30A0A087WSZ9 112 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 TRAV5A0A0B4J249 113 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 RNF223E7ERA6 249 aa7.88□□□□□ -1.15
VPS25-202ENST00000589219 K7EN84 100 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms