RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 AGPAT2O15120 278 aa13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 LGALSLQ3ZCW2 172 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 C9orf62Q8N4C0 152 aa13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 GNPNAT1Q96EK6 184 aaPredicted RBP13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 MGST2Q99735 147 aa13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 PEMTQ9UBM1 199 aa13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 PFDN2Q9UHV9 154 aa13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 UFC1Q9Y3C8 167 aa13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 TENM1Q9UKZ4 2725 aa13.03□□□□□ -0.32
SCAMP4-211ENST00000588907 HNRNPCP07910 306 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 RPL29P47914 159 aaKnown RBP13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 ELLP55199 621 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 KLF5Q13887 457 aaPredicted RBP13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 OPCMLQ14982 345 aa13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 SPATA3Q8NHX4 192 aa13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 TMEM190Q8WZ59 177 aa13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 GGTLC1Q9BX51 225 aa13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 WFDC1Q9HC57 220 aa13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 SLC45A2Q9UMX9 530 aa13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 PUS1Q9Y606 427 aaKnown RBP eCLIP13.02□□□□□ -0.33
SCAMP4-211ENST00000588907 A8MWP6 167 aa13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 YIF1AO95070 293 aa13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 PSG1P11464 419 aa13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 BMI1P35226 326 aa13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 ZNF90Q03938 601 aa13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 Q6ZRG5 221 aa13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 RNF125Q96EQ8 232 aa13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 PSMG3Q9BT73 122 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 ZNF471Q9BX82 626 aaPredicted RBP13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 DAZ1Q9NQZ3 744 aaKnown RBP13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 RNF24Q9Y225 148 aa13.01□□□□□ -0.33
SCAMP4-211ENST00000588907 K7EMT4 169 aa13□□□□□ -0.33
SCAMP4-211ENST00000588907 IL4P05112 153 aa13□□□□□ -0.33
SCAMP4-211ENST00000588907 LINC00869P0C866 280 aa13□□□□□ -0.33
SCAMP4-211ENST00000588907 TPT1P13693 172 aaKnown RBP13□□□□□ -0.33
SCAMP4-211ENST00000588907 RPL7L1Q6DKI1 246 aaKnown RBP13□□□□□ -0.33
SCAMP4-211ENST00000588907 HIST2H2BDQ6DRA6 164 aa13□□□□□ -0.33
SCAMP4-211ENST00000588907 TOMM20LQ6UXN7 152 aa13□□□□□ -0.33
SCAMP4-211ENST00000588907 SLC51BQ86UW2 128 aa13□□□□□ -0.33
SCAMP4-211ENST00000588907 STPG3Q8N7X2 389 aa13□□□□□ -0.33
SCAMP4-211ENST00000588907 STOML3Q8TAV4 291 aa13□□□□□ -0.33
SCAMP4-211ENST00000588907 NARS2Q96I59 477 aaKnown RBP13□□□□□ -0.33
SCAMP4-211ENST00000588907 ELOA3CA0A087WX78 387 aaPredicted RBP12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 ZNF320A2RRD8 509 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 TSPAN15O95858 294 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 SLURP1P55000 103 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 PLP1P60201 277 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 B2MP61769 119 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 SERF2P84101 59 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 PRR20EP86478 221 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 PRR20CP86479 221 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 PRR20DP86480 221 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 PRR20BP86481 221 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 PRR20AP86496 221 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 EIF5AL1Q6IS14 154 aaKnown RBP12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 OR1L4Q8NGR5 311 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 MARC2Q969Z3 335 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 DUX3Q96PT4 197 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 METTL26Q96S19 204 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 PFDN5Q99471 154 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 ZFAND3Q9H8U3 227 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 CYTL1Q9NRR1 136 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 PXMP4Q9Y6I8 212 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 STAB1Q9NY15 2570 aa12.99□□□□□ -0.33
SCAMP4-211ENST00000588907 IGHV3-35A0A0C4DH35 117 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 OVOL1O14753 267 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 LINC00482Q8N8I6 264 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 HSD17B11Q8NBQ5 300 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 OR9G4Q8NGQ1 327 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 OR2G3Q8NGZ4 309 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 C20orf24Q9BUV8 137 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 ELOVL1Q9BW60 279 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 ARV1Q9H2C2 271 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 SLC39A9Q9NUM3 307 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 RABAC1Q9UI14 185 aa12.98□□□□□ -0.33
SCAMP4-211ENST00000588907 HYPMO75409 117 aa12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 MBP02144 154 aa12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 NPPCP23582 126 aa12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 ATP6V0CP27449 155 aa12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 LYZP61626 148 aa12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 LAMTOR1Q6IAA8 161 aa12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 DLX4Q92988 240 aaPredicted RBP12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 MCRIP2Q9BUT9 160 aaKnown RBP12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 TMEM231Q9H6L2 316 aa12.97□□□□□ -0.33
SCAMP4-211ENST00000588907 A0A1W2PS18 150 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 BOLA2-SMG1P6H3BVE0 249 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 COX7A2P2O60397 106 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 NKX2-5P52952 324 aaPredicted RBP12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 MIC13Q5XKP0 118 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 UNQ9165/PRO28630Q6UXU0 137 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 BAP18Q8IXM2 172 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 GATAD1Q8WUU5 269 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 RCC1LQ96I51 464 aaKnown RBP12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 RNF2Q99496 336 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 RSG1Q9BU20 258 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 PBDC1Q9BVG4 233 aa12.96□□□□□ -0.33
SCAMP4-211ENST00000588907 SIGLEC8Q9NYZ4 499 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms