RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 SCGB2B2Q4G0G5 96 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 FAAP20Q6NZ36 180 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 ZNF575Q86XF7 245 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 ACY3Q96HD9 319 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 CLUHP3Q96NS8 147 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 SAV1Q9H4B6 383 aaPredicted RBP13.09□□□□□ -0.31
CCDC43-204ENST00000588687 VCX3AQ9NNX9 186 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 EXTL2Q9UBQ6 330 aa13.09□□□□□ -0.31
CCDC43-204ENST00000588687 IGLV2-18A0A075B6J9 118 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 TEX13DA0A0J9YY54 714 aaPredicted RBP13.08□□□□□ -0.32
CCDC43-204ENST00000588687 SMIM9A6NGZ8 99 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 FAM25AB3EWG3 89 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 FAM25CB3EWG5 89 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 FAM25GB3EWG6 89 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 RAB3DO95716 219 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 RORCP51449 518 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 TAS2R19P59542 299 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 STEAP1BQ6NZ63 245 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 OR51G1Q8NGK1 321 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 RNF125Q96EQ8 232 aa13.08□□□□□ -0.32
CCDC43-204ENST00000588687 IGKV1D-37A0A075B6S9 117 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 CRYM-AS1A6NIL9 109 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 CEBPZOSA8MTT3 80 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 EMP1P54849 157 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 FXYD7P58549 80 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 ZNF79Q15937 498 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 FAM222AQ5U5X8 452 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 GPR107Q5VW38 600 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 TMEM268Q5VZI3 342 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 ETFRF1Q6IPR1 90 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 FOXI2Q6ZQN5 318 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 RFNGQ9Y644 331 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 TMEM56-RWDD3S4R434 201 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 DNAH5Q8TE73 4624 aa13.07□□□□□ -0.32
CCDC43-204ENST00000588687 TNFAIP8O95379 198 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 IGKV3-20P01619 116 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 SURF2Q15527 256 aaPredicted RBP13.06□□□□□ -0.32
CCDC43-204ENST00000588687 CTF1Q16619 201 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 OR8G2PQ6IF36 304 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 GSG1LQ6UXU4 331 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 C1orf158Q8N1D5 194 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 NAA50Q9GZZ1 169 aaKnown RBP13.06□□□□□ -0.32
CCDC43-204ENST00000588687 SLC35B3Q9H1N7 401 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 MIXL1Q9H2W2 232 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 PLA2G2EQ9NZK7 142 aa13.06□□□□□ -0.32
CCDC43-204ENST00000588687 TEX48A0A1B0GUV7 120 aa13.05□□□□□ -0.32
CCDC43-204ENST00000588687 GABARAPO95166 117 aa13.05□□□□□ -0.32
CCDC43-204ENST00000588687 IFNA10P01566 189 aa13.05□□□□□ -0.32
CCDC43-204ENST00000588687 PSMB3P49720 205 aa13.05□□□□□ -0.32
CCDC43-204ENST00000588687 PAX9P55771 341 aa13.05□□□□□ -0.32
CCDC43-204ENST00000588687 OXA1LQ15070 435 aa13.05□□□□□ -0.32
CCDC43-204ENST00000588687 MZT2AQ6P582 158 aa13.05□□□□□ -0.32
CCDC43-204ENST00000588687 NIPSNAP3BQ9BS92 247 aa13.05□□□□□ -0.32
CCDC43-204ENST00000588687 IGHV3OR16-12A0A075B7B8 117 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 GABARAPH6UMI1 98 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 NUP62P37198 522 aaPredicted RBP13.04□□□□□ -0.32
CCDC43-204ENST00000588687 ZNF90Q03938 601 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 RNF212Q495C1 297 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 UBE2DNLQ8IWF7 75 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 AP3S1Q92572 193 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 PRR13Q9NZ81 148 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 HSPB7Q9UBY9 170 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 GPR132Q9UNW8 380 aa13.04□□□□□ -0.32
CCDC43-204ENST00000588687 C14orf166Q9Y224 244 aaKnown RBP13.04□□□□□ -0.32
CCDC43-204ENST00000588687 A8MTW9 85 aa13.03□□□□□ -0.32
CCDC43-204ENST00000588687 F6UB75 175 aa13.03□□□□□ -0.32
CCDC43-204ENST00000588687 IFNA21P01568 189 aa13.03□□□□□ -0.32
CCDC43-204ENST00000588687 ZNF182P17025 639 aaPredicted RBP13.03□□□□□ -0.32
CCDC43-204ENST00000588687 SUPT4H1P63272 117 aaKnown RBP13.03□□□□□ -0.32
CCDC43-204ENST00000588687 SSBP1Q04837 148 aaKnown RBP13.03□□□□□ -0.32
CCDC43-204ENST00000588687 OR4C16Q8NGL9 310 aa13.03□□□□□ -0.32
CCDC43-204ENST00000588687 IL22RA2Q969J5 263 aa13.03□□□□□ -0.32
CCDC43-204ENST00000588687 C17orf77Q96MU5 243 aa13.03□□□□□ -0.32
CCDC43-204ENST00000588687 PBDC1Q9BVG4 233 aa13.03□□□□□ -0.32
CCDC43-204ENST00000588687 YTHDF2Q9Y5A9 579 aaKnown RBP13.03□□□□□ -0.32
CCDC43-204ENST00000588687 SULT1A3P0DMM9 295 aa13.02□□□□□ -0.33
CCDC43-204ENST00000588687 SULT1A4P0DMN0 295 aa13.02□□□□□ -0.33
CCDC43-204ENST00000588687 GAMTQ14353 236 aa13.02□□□□□ -0.33
CCDC43-204ENST00000588687 TMEM88Q6PEY1 159 aa13.02□□□□□ -0.33
CCDC43-204ENST00000588687 NOXA1Q86UR1 476 aa13.02□□□□□ -0.33
CCDC43-204ENST00000588687 C15orf40Q8WUR7 153 aa13.02□□□□□ -0.33
CCDC43-204ENST00000588687 SMIM4Q8WVI0 70 aa13.02□□□□□ -0.33
CCDC43-204ENST00000588687 LINC00052Q96N35 136 aa13.02□□□□□ -0.33
CCDC43-204ENST00000588687 A0A0J9YX75 114 aa13.01□□□□□ -0.33
CCDC43-204ENST00000588687 LOC102723971A0A1B0GUV8 181 aa13.01□□□□□ -0.33
CCDC43-204ENST00000588687 KLF9Q13886 244 aaPredicted RBP13.01□□□□□ -0.33
CCDC43-204ENST00000588687 C1orf194Q5T5A4 169 aa13.01□□□□□ -0.33
CCDC43-204ENST00000588687 FAM78BQ5VT40 261 aa13.01□□□□□ -0.33
CCDC43-204ENST00000588687 AMTNQ6UX39 209 aa13.01□□□□□ -0.33
CCDC43-204ENST00000588687 DTD1Q8TEA8 209 aa13.01□□□□□ -0.33
CCDC43-204ENST00000588687 U3KQ87 197 aa13.01□□□□□ -0.33
CCDC43-204ENST00000588687 IGKV1OR2-108A0A075B7D4 117 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 ISLRO14498 428 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 PSG9Q00887 426 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 SPATA31B1PQ5VZV4 182 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 LGI3Q8N145 548 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 OR4B1Q8NGF8 309 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 COQ8AQ8NI60 647 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 C20orf173Q96LM9 149 aa13□□□□□ -0.33
CCDC43-204ENST00000588687 RBKSQ9H477 322 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms