RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 COPZ1P61923 177 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 GNG5P63218 68 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 PSG4Q00888 419 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 EMX1Q04741 257 aaPredicted RBP1.87□□□□□ -2.11
VPS4B-203ENST00000588323 FMODQ06828 376 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 C1DQ13901 141 aaKnown RBP1.87□□□□□ -2.11
VPS4B-203ENST00000588323 RHEBQ15382 184 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 BATFQ16520 125 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 TMEM241Q24JQ0 296 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 OCIAD2Q56VL3 154 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 SDK2Q58EX2 2172 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 FAM222AQ5U5X8 452 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 NANOGP8Q6NSW7 305 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 NAA40Q86UY6 237 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 ACBD7Q8N6N7 88 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 OR10G2Q8NGC3 310 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 OR1L8Q8NGR8 309 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 ZNF675Q8TD23 568 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 SLC37A2Q8TED4 501 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 NAT14Q8WUY8 206 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 ASB13Q8WXK3 278 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 GALMQ96C23 342 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 ROPN1LQ96C74 230 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 ISOC1Q96CN7 298 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 CMBLQ96DG6 245 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 SLC35G5Q96KT7 338 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 GPR82Q96P67 336 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 GINS4Q9BRT9 223 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 LXNQ9BS40 222 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 THTPAQ9BU02 230 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 MROQ9BYG7 248 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 SMIM3Q9BZL3 60 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 C20orf27Q9GZN8 174 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 HES4Q9HCC6 221 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 TRAPPC2LQ9UL33 140 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 POLR1DQ9Y2S0 133 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 PCYT1BQ9Y5K3 369 aaPredicted RBP1.87□□□□□ -2.11
VPS4B-203ENST00000588323 MYO18AQ92614 2054 aaKnown RBP1.87□□□□□ -2.11
VPS4B-203ENST00000588323 LRP4O75096 1905 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 PKDREJQ9NTG1 2253 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 NSD1Q96L73 2696 aaPredicted RBP1.86□□□□□ -2.11
VPS4B-203ENST00000588323 ANK1P16157 1881 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 RTTNQ86VV8 2226 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 MYH6P13533 1939 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 MYLKQ15746 1914 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 ABCA4P78363 2273 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 MEIKINA0A087WXM9 373 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 A0A1B0GV50 99 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 EXOC1LA0A1B0GW35 172 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 A0A1W2PRE2 83 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 FAM159BA6NKW6 160 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 C1orf196B1AJZ1 125 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 H3BSA7 217 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 H7C1C5 153 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 MFSD11O43934 449 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 ARL6IP5O75915 188 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 SNAPC5O75971 98 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 CXorf1O96002 111 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 HTR1AP08908 422 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 UCHL1P09936 223 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 CD28P10747 220 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 REG1BP48304 166 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 RAB5CP51148 216 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 MP68P56378 58 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 TAS2R30P59541 319 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 LCN6P62502 163 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 ACOT6Q3I5F7 207 aaPredicted RBP1.86□□□□□ -2.11
VPS4B-203ENST00000588323 SCGB2B2Q4G0G5 96 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 TRMT12Q53H54 448 aaKnown RBP1.86□□□□□ -2.11
VPS4B-203ENST00000588323 CENPWQ5EE01 88 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 TMEM69Q5SWH9 247 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 TEX36Q5VZQ5 186 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 Q5W150 140 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 ZFAND6Q6FIF0 208 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 HAGHLQ6PII5 290 aaPredicted RBP1.86□□□□□ -2.11
VPS4B-203ENST00000588323 TOMM20LQ6UXN7 152 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 GTF2H5Q6ZYL4 71 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 TCF24Q7RTU0 167 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 FAM19A3Q7Z5A8 133 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 TCTEX1D1Q8N7M0 179 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 ZNF676Q8N7Q3 588 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 GDPD1Q8N9F7 314 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 OR2M3Q8NG83 312 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 GPR32P1Q8NGA4 272 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 OR8A1Q8NGG7 326 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 OR5A1Q8NGJ0 315 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 OR51A2Q8NGJ7 313 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 OR4X1Q8NH49 305 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 ACOT12Q8WYK0 555 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 ACY3Q96HD9 319 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 PYURFQ96I23 114 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 DNAJC30Q96LL9 226 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 AP1S3Q96PC3 154 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 OR7D2Q96RA2 312 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 OR52E6Q96RD3 313 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 OR2D2Q9H210 308 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 VSIRQ9H7M9 311 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 LRTM1Q9HBL6 345 aa1.86□□□□□ -2.11
VPS4B-203ENST00000588323 RSL24D1Q9UHA3 163 aaKnown RBP1.86□□□□□ -2.11
VPS4B-203ENST00000588323 SCP2D1Q9UJQ7 156 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms