RNA–Protein interactions for RNA: ENST00000588059.5

VPS4B-202, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-202ENST00000588059 LGI3Q8N145 548 aa7.92□□□□□ -1.14
VPS4B-202ENST00000588059 OR52E5Q8NH55 327 aa7.92□□□□□ -1.14
VPS4B-202ENST00000588059 IL22RA2Q969J5 263 aa7.92□□□□□ -1.14
VPS4B-202ENST00000588059 GINS3Q9BRX5 216 aa7.92□□□□□ -1.14
VPS4B-202ENST00000588059 SRRQ9GZT4 340 aa7.92□□□□□ -1.14
VPS4B-202ENST00000588059 HEYLQ9NQ87 328 aaPredicted RBP7.92□□□□□ -1.14
VPS4B-202ENST00000588059 NDUFA13Q9P0J0 144 aa7.92□□□□□ -1.14
VPS4B-202ENST00000588059 IGHV3-66A0A0C4DH42 116 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 LINC00854A0A1B0GVQ3 168 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 KNCNA6PVL3 124 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 C16orf90A8MZG2 172 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 CORTO00230 105 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 SULT1A3P0DMM9 295 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 SULT1A4P0DMN0 295 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 VAMP1P23763 118 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 RPL11P62913 178 aaKnown RBP7.91□□□□□ -1.14
VPS4B-202ENST00000588059 SUPT4H1P63272 117 aaKnown RBP7.91□□□□□ -1.14
VPS4B-202ENST00000588059 SRPXP78539 464 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 BAK1Q16611 211 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 TOMM20LQ6UXN7 152 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 LYZL2Q7Z4W2 148 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 UBE2DNLQ8IWF7 75 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 SLC25A21Q9BQT8 299 aaPredicted RBP7.91□□□□□ -1.14
VPS4B-202ENST00000588059 RABAC1Q9UI14 185 aa7.91□□□□□ -1.14
VPS4B-202ENST00000588059 A0A0B4J2A0 478 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 K7EQG2 157 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 HTR2BP41595 481 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 CCR6P51684 374 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 SMCO1Q147U7 214 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 MLANAQ16655 118 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 AARDQ4LEZ3 155 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 TMEM128Q5BJH2 165 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 C1orf134Q5TEV5 83 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 SLC24A4Q8NFF2 622 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 OR1S1Q8NH92 325 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 DEDD2Q8WXF8 326 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 GRAMD2BQ96HH9 432 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 ZFAND3Q9H8U3 227 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 SHPKQ9UHJ6 478 aa7.9□□□□□ -1.14
VPS4B-202ENST00000588059 PIGBOS1A0A0B4J2F0 54 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 RPS10-NUDT3A0A1W2PQS6 291 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 SCGB2A1O75556 95 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 TMEM50AO95807 157 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 IFNA21P01568 189 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 NMSQ5H8A3 153 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 ACTL10Q5JWF8 245 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 Q8N1X5 172 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 STXBP6Q8NFX7 210 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 FNDC4Q9H6D8 234 aaPredicted RBP7.89□□□□□ -1.15
VPS4B-202ENST00000588059 CACFD1Q9UGQ2 172 aa7.89□□□□□ -1.15
VPS4B-202ENST00000588059 NAP1L6A6NFF2 107 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 CENPXA8MT69 81 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 CLN5O75503 358 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 SFT2D2O95562 160 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 NPY1RP25929 384 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 TNP2Q05952 138 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 PPP1R1AQ13522 171 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 BSXQ3C1V8 233 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 C2orf83Q53S99 150 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 ZNF600Q6ZNG1 722 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 RBKSQ9H477 322 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 TMEM231Q9H6L2 316 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 MRPL36Q9P0J6 103 aaKnown RBP7.88□□□□□ -1.15
VPS4B-202ENST00000588059 PUS1Q9Y606 427 aaKnown RBP eCLIP7.88□□□□□ -1.15
VPS4B-202ENST00000588059 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
VPS4B-202ENST00000588059 A0A1B0GU03 582 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 DUXBA0A1W2PPF3 345 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 HOXB5P09067 269 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 IL7P13232 177 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 RNF212Q495C1 297 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 NOXA1Q86UR1 476 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 OR4X1Q8NH49 305 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 RNASEH2CQ8TDP1 164 aaKnown RBP7.87□□□□□ -1.15
VPS4B-202ENST00000588059 DTD1Q8TEA8 209 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 DCANP1Q8TF63 244 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 FAM210BQ96KR6 192 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 SDHCQ99643 169 aaPredicted RBP7.87□□□□□ -1.15
VPS4B-202ENST00000588059 HSPB7Q9UBY9 170 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 FLVCR2Q9UPI3 526 aa7.87□□□□□ -1.15
VPS4B-202ENST00000588059 TRAV30A0A087WSZ9 112 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 NDUFB6O95139 128 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 SLC25A4P12235 298 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 P2RY1P47900 373 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 RND2P52198 227 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 TIGITQ495A1 244 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 ETFRF1Q6IPR1 90 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 PRSS54Q6PEW0 395 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 ACY3Q96HD9 319 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 SCRT2Q9NQ03 307 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 XCL2Q9UBD3 114 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 PAIP2BQ9ULR5 123 aaKnown RBP7.86□□□□□ -1.15
VPS4B-202ENST00000588059 U3KQ87 197 aa7.86□□□□□ -1.15
VPS4B-202ENST00000588059 A0A1W2PS18 150 aa7.85□□□□□ -1.15
VPS4B-202ENST00000588059 C9orf170A2RU37 121 aa7.85□□□□□ -1.15
VPS4B-202ENST00000588059 SPART-AS1P0CW21 52 aa7.85□□□□□ -1.15
VPS4B-202ENST00000588059 IAPPP10997 89 aa7.85□□□□□ -1.15
VPS4B-202ENST00000588059 NPPCP23582 126 aa7.85□□□□□ -1.15
VPS4B-202ENST00000588059 OR10J1P30954 320 aa7.85□□□□□ -1.15
VPS4B-202ENST00000588059 UBE2MP61081 183 aaKnown RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms