RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 MAGT1Q9H0U3 335 aa13.01□□□□□ -0.33
TPM4-206ENST00000587201 NDUFA13Q9P0J0 144 aa13.01□□□□□ -0.33
TPM4-206ENST00000587201 FLVCR2Q9UPI3 526 aa13.01□□□□□ -0.33
TPM4-206ENST00000587201 RYR2Q92736 4967 aa13.01□□□□□ -0.33
TPM4-206ENST00000587201 WRBO00258 174 aa13□□□□□ -0.33
TPM4-206ENST00000587201 SYNGR2O43760 224 aa13□□□□□ -0.33
TPM4-206ENST00000587201 CA1P00915 261 aaPredicted RBP13□□□□□ -0.33
TPM4-206ENST00000587201 RPP30P78346 268 aaKnown RBP13□□□□□ -0.33
TPM4-206ENST00000587201 DHRS2Q13268 280 aa13□□□□□ -0.33
TPM4-206ENST00000587201 COQ8AQ8NI60 647 aa13□□□□□ -0.33
TPM4-206ENST00000587201 DCANP1Q8TF63 244 aa13□□□□□ -0.33
TPM4-206ENST00000587201 GATAD1Q8WUU5 269 aa13□□□□□ -0.33
TPM4-206ENST00000587201 RNF125Q96EQ8 232 aa13□□□□□ -0.33
TPM4-206ENST00000587201 C7orf50Q9BRJ6 194 aaKnown RBP13□□□□□ -0.33
TPM4-206ENST00000587201 PBDC1Q9BVG4 233 aa13□□□□□ -0.33
TPM4-206ENST00000587201 SACSQ9NZJ4 4579 aa13□□□□□ -0.33
TPM4-206ENST00000587201 ADAP1O75689 374 aa12.99□□□□□ -0.33
TPM4-206ENST00000587201 IL7P13232 177 aa12.99□□□□□ -0.33
TPM4-206ENST00000587201 ZNF90Q03938 601 aa12.99□□□□□ -0.33
TPM4-206ENST00000587201 PMS2P11Q13670 270 aa12.99□□□□□ -0.33
TPM4-206ENST00000587201 IGKV1D-37A0A075B6S9 117 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 CXorf65A6NEN9 183 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 BUB3O43684 328 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 JTBO76095 146 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 FABP1P07148 127 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 OR4E1P0C645 316 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 EWSR1Q01844 656 aaKnown RBP eCLIP12.98□□□□□ -0.331e-6■■■□□ 16.2
TPM4-206ENST00000587201 C4orf46Q504U0 113 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 SIGLEC15Q6ZMC9 328 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 TMEM217Q8N7C4 229 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 RARRES2Q99969 163 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
TPM4-206ENST00000587201 KNCNA6PVL3 124 aa12.97□□□□□ -0.33
TPM4-206ENST00000587201 IFNA21P01568 189 aa12.97□□□□□ -0.33
TPM4-206ENST00000587201 ANXA7P20073 488 aaKnown RBP12.97□□□□□ -0.33
TPM4-206ENST00000587201 BTCP35070 178 aa12.97□□□□□ -0.33
TPM4-206ENST00000587201 NUP62P37198 522 aaPredicted RBP12.97□□□□□ -0.33
TPM4-206ENST00000587201 LYZP61626 148 aa12.97□□□□□ -0.33
TPM4-206ENST00000587201 SPANXN5Q5MJ07 72 aa12.97□□□□□ -0.33
TPM4-206ENST00000587201 OR8G2PQ6IF36 304 aa12.97□□□□□ -0.33
TPM4-206ENST00000587201 SNRPGP15A8MWD9 76 aa12.96□□□□□ -0.33
TPM4-206ENST00000587201 H3BP45 60 aa12.96□□□□□ -0.33
TPM4-206ENST00000587201 OR2F1Q13607 317 aa12.96□□□□□ -0.33
TPM4-206ENST00000587201 PSMG4Q5JS54 123 aa12.96□□□□□ -0.33
TPM4-206ENST00000587201 ACTL10Q5JWF8 245 aa12.96□□□□□ -0.33
TPM4-206ENST00000587201 TRPT1Q86TN4 253 aaKnown RBP12.96□□□□□ -0.33
TPM4-206ENST00000587201 OR11H2Q8NH07 326 aa12.96□□□□□ -0.33
TPM4-206ENST00000587201 TRGV9Q99603 122 aa12.96□□□□□ -0.33
TPM4-206ENST00000587201 NRN1Q9NPD7 142 aa12.96□□□□□ -0.33
TPM4-206ENST00000587201 ATF4P18848 351 aaPredicted RBP12.95□□□□□ -0.34
TPM4-206ENST00000587201 NKX2-1P43699 371 aaPredicted RBP12.95□□□□□ -0.34
TPM4-206ENST00000587201 SNRPD3P62318 126 aaKnown RBP12.95□□□□□ -0.34
TPM4-206ENST00000587201 ID3Q02535 119 aa12.95□□□□□ -0.34
TPM4-206ENST00000587201 THAP8Q8NA92 274 aa12.95□□□□□ -0.34
TPM4-206ENST00000587201 STRAPQ9Y3F4 350 aaKnown RBP12.95□□□□□ -0.34
TPM4-206ENST00000587201 POLR2GP62487 172 aaKnown RBP eCLIP12.94□□□□□ -0.34
TPM4-206ENST00000587201 CNPY1Q3B7I2 92 aa12.94□□□□□ -0.34
TPM4-206ENST00000587201 MORN3Q6PF18 240 aaPredicted RBP12.94□□□□□ -0.34
TPM4-206ENST00000587201 OR4D5Q8NGN0 318 aa12.94□□□□□ -0.34
TPM4-206ENST00000587201 PPP1R14BQ96C90 147 aa12.94□□□□□ -0.34
TPM4-206ENST00000587201 RAB40CQ96S21 281 aa12.94□□□□□ -0.34
TPM4-206ENST00000587201 IGKV1OR2-108A0A075B7D4 117 aa12.93□□□□□ -0.34
TPM4-206ENST00000587201 NUPR2A6NF83 97 aa12.93□□□□□ -0.34
TPM4-206ENST00000587201 PRSS46E5RG02 174 aa12.93□□□□□ -0.34
TPM4-206ENST00000587201 SPP1P10451 314 aa12.93□□□□□ -0.34
TPM4-206ENST00000587201 SEPSECSQ9HD40 501 aaKnown RBP12.93□□□□□ -0.34
TPM4-206ENST00000587201 PSENENQ9NZ42 101 aa12.93□□□□□ -0.34
TPM4-206ENST00000587201 PLA2G10O15496 165 aa12.92□□□□□ -0.34
TPM4-206ENST00000587201 LYRM1O43325 122 aa12.92□□□□□ -0.34
TPM4-206ENST00000587201 SSSCA1O60232 199 aa12.92□□□□□ -0.34
TPM4-206ENST00000587201 SCGB1D2O95969 90 aa12.92□□□□□ -0.34
TPM4-206ENST00000587201 CFDP00746 253 aaPredicted RBP12.92□□□□□ -0.34
TPM4-206ENST00000587201 AKR1C1Q04828 323 aa12.92□□□□□ -0.34
TPM4-206ENST00000587201 TMEM41BQ5BJD5 291 aa12.92□□□□□ -0.34
TPM4-206ENST00000587201 C20orf85Q9H1P6 137 aa12.92□□□□□ -0.34
TPM4-206ENST00000587201 FBXL17Q9UF56 701 aa12.92□□□□□ -0.34
TPM4-206ENST00000587201 IAH1Q2TAA2 248 aaPredicted RBP12.91□□□□□ -0.34
TPM4-206ENST00000587201 C1orf194Q5T5A4 169 aa12.91□□□□□ -0.34
TPM4-206ENST00000587201 CEMP1Q6PRD7 247 aaPredicted RBP12.91□□□□□ -0.34
TPM4-206ENST00000587201 ACOT7LQ6ZUV0 252 aa12.91□□□□□ -0.34
TPM4-206ENST00000587201 MITD1Q8WV92 249 aa12.91□□□□□ -0.34
TPM4-206ENST00000587201 C11orf68Q9H3H3 251 aaKnown RBP12.91□□□□□ -0.34
TPM4-206ENST00000587201 DNAH1Q9P2D7 4330 aa12.91□□□□□ -0.34
TPM4-206ENST00000587201 PLECQ15149 4684 aaKnown RBP12.91□□□□□ -0.34
TPM4-206ENST00000587201 AGRNO00468 2067 aa12.9□□□□□ -0.34
TPM4-206ENST00000587201 SMCO3A2RU48 225 aa12.9□□□□□ -0.34
TPM4-206ENST00000587201 GIG44P09565 113 aaPredicted RBP12.9□□□□□ -0.34
TPM4-206ENST00000587201 C4BPBP20851 252 aa12.9□□□□□ -0.34
TPM4-206ENST00000587201 OR8I2Q8N0Y5 310 aa12.9□□□□□ -0.34
TPM4-206ENST00000587201 BPIFCQ8NFQ6 507 aa12.9□□□□□ -0.34
TPM4-206ENST00000587201 GSKIPQ9P0R6 139 aa12.9□□□□□ -0.34
TPM4-206ENST00000587201 DEFB4AO15263 64 aa12.89□□□□□ -0.35
TPM4-206ENST00000587201 TCRBP04435 133 aa12.89□□□□□ -0.35
TPM4-206ENST00000587201 GATA2P23769 480 aaPredicted RBP12.89□□□□□ -0.35
TPM4-206ENST00000587201 ID1P41134 155 aa12.89□□□□□ -0.35
TPM4-206ENST00000587201 TMEM144Q7Z5S9 345 aa12.89□□□□□ -0.35
TPM4-206ENST00000587201 ZBTB8BQ8NAP8 495 aaPredicted RBP12.89□□□□□ -0.35
TPM4-206ENST00000587201 C11orf45Q8TAV5 145 aa12.89□□□□□ -0.35
TPM4-206ENST00000587201 SMIM8Q96KF7 97 aa12.89□□□□□ -0.35
TPM4-206ENST00000587201 LINC00052Q96N35 136 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms