RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 PSG1P11464 419 aa13.9□□□□□ -0.18
TRAF4-216ENST00000586813 OR4C16Q8NGL9 310 aa13.9□□□□□ -0.18
TRAF4-216ENST00000586813 SMIM4Q8WVI0 70 aa13.9□□□□□ -0.18
TRAF4-216ENST00000586813 AKAIN1P0CW23 69 aa13.89□□□□□ -0.19
TRAF4-216ENST00000586813 ZNF705AQ6ZN79 300 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-216ENST00000586813 OR51G1Q8NGK1 321 aa13.89□□□□□ -0.19
TRAF4-216ENST00000586813 IL22RA2Q969J5 263 aa13.89□□□□□ -0.19
TRAF4-216ENST00000586813 RNF125Q96EQ8 232 aa13.89□□□□□ -0.19
TRAF4-216ENST00000586813 SCRT1Q9BWW7 348 aa13.89□□□□□ -0.19
TRAF4-216ENST00000586813 PRR13Q9NZ81 148 aa13.89□□□□□ -0.19
TRAF4-216ENST00000586813 DNAH17Q9UFH2 4485 aa13.89□□□□□ -0.19
TRAF4-216ENST00000586813 IFNA10P01566 189 aa13.88□□□□□ -0.19
TRAF4-216ENST00000586813 P0DMU3 169 aa13.88□□□□□ -0.19
TRAF4-216ENST00000586813 FAM231AP0DMU4 169 aa13.88□□□□□ -0.19
TRAF4-216ENST00000586813 FAM231CP0DMU5 169 aa13.88□□□□□ -0.19
TRAF4-216ENST00000586813 NKX2-1P43699 371 aaPredicted RBP13.88□□□□□ -0.19
TRAF4-216ENST00000586813 GDF5OSQ5U4N7 250 aa13.88□□□□□ -0.19
TRAF4-216ENST00000586813 POM121L12Q8N7R1 296 aa13.88□□□□□ -0.19
TRAF4-216ENST00000586813 PRRT1Q99946 306 aa13.88□□□□□ -0.19
TRAF4-216ENST00000586813 NDUFAF3Q9BU61 184 aa13.88□□□□□ -0.19
TRAF4-216ENST00000586813 ZNF705FA8MVS1 300 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-216ENST00000586813 CTDSP2O14595 271 aa13.87□□□□□ -0.19
TRAF4-216ENST00000586813 ZNF705DP0CH99 300 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-216ENST00000586813 ZNF705BP0CI00 300 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-216ENST00000586813 NUP62P37198 522 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-216ENST00000586813 OR51S1Q8NGJ8 323 aa13.87□□□□□ -0.19
TRAF4-216ENST00000586813 DTD1Q8TEA8 209 aa13.87□□□□□ -0.19
TRAF4-216ENST00000586813 NEU1Q99519 415 aa13.87□□□□□ -0.19
TRAF4-216ENST00000586813 HSPB7Q9UBY9 170 aa13.87□□□□□ -0.19
TRAF4-216ENST00000586813 U3KQ87 197 aa13.87□□□□□ -0.19
TRAF4-216ENST00000586813 A0A1B0GVY2 172 aa13.86□□□□□ -0.19
TRAF4-216ENST00000586813 CTDSPLO15194 276 aa13.86□□□□□ -0.19
TRAF4-216ENST00000586813 DEFB1P60022 68 aa13.86□□□□□ -0.19
TRAF4-216ENST00000586813 KLF9Q13886 244 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-216ENST00000586813 OR8G2PQ6IF36 304 aa13.86□□□□□ -0.19
TRAF4-216ENST00000586813 LGI3Q8N145 548 aa13.86□□□□□ -0.19
TRAF4-216ENST00000586813 PBDC1Q9BVG4 233 aa13.86□□□□□ -0.19
TRAF4-216ENST00000586813 WDR12Q9GZL7 423 aaKnown RBP13.86□□□□□ -0.19
TRAF4-216ENST00000586813 KCNIP3Q9Y2W7 256 aa13.86□□□□□ -0.19
TRAF4-216ENST00000586813 IGKV3-20P01619 116 aa13.85□□□□□ -0.19
TRAF4-216ENST00000586813 CCR6P51684 374 aa13.85□□□□□ -0.19
TRAF4-216ENST00000586813 IL18Q14116 193 aa13.85□□□□□ -0.19
TRAF4-216ENST00000586813 SMCO1Q147U7 214 aa13.85□□□□□ -0.19
TRAF4-216ENST00000586813 CLVS1Q8IUQ0 354 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-216ENST00000586813 RBKSQ9H477 322 aa13.85□□□□□ -0.19
TRAF4-216ENST00000586813 SAV1Q9H4B6 383 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-216ENST00000586813 PFDN2Q9UHV9 154 aa13.85□□□□□ -0.19
TRAF4-216ENST00000586813 IGKV1D-37A0A075B6S9 117 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 A0A0B4J2A0 478 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 TMEM189A5PLL7 270 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 SMIM9A6NGZ8 99 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 ZFP92A6NM28 416 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 SPART-AS1P0CW21 52 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 PSMB3P49720 205 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 EMP1P54849 157 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 FXYD7P58549 80 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 ZNF90Q03938 601 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 SPCS2Q15005 226 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 FOXI2Q6ZQN5 318 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 ZNF709Q8N972 641 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 LINC00052Q96N35 136 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 SHPKQ9UHJ6 478 aa13.84□□□□□ -0.19
TRAF4-216ENST00000586813 IGHV3OR16-12A0A075B7B8 117 aa13.83□□□□□ -0.2
TRAF4-216ENST00000586813 ANKRD20A5PA0PJZ0 165 aa13.83□□□□□ -0.2
TRAF4-216ENST00000586813 SOCS3O14543 225 aa13.83□□□□□ -0.2
TRAF4-216ENST00000586813 SUPT4H1P63272 117 aaKnown RBP13.83□□□□□ -0.2
TRAF4-216ENST00000586813 LYZL2Q7Z4W2 148 aa13.83□□□□□ -0.2
TRAF4-216ENST00000586813 DIRAS2Q96HU8 199 aa13.83□□□□□ -0.2
TRAF4-216ENST00000586813 SCP2D1Q9UJQ7 156 aa13.83□□□□□ -0.2
TRAF4-216ENST00000586813 PKD1P98161 4303 aa13.83□□□□□ -0.2
TRAF4-216ENST00000586813 RTL8CO15255 209 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 GPX4P36969 197 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-216ENST00000586813 ID1P41134 155 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 GAMTQ14353 236 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 C1orf194Q5T5A4 169 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 COQ8AQ8NI60 647 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 SLC35E1Q96K37 410 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 CLUHP3Q96NS8 147 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 SCGB3A2Q96PL1 93 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 RABL2AQ9UBK7 228 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-216ENST00000586813 RABL2BQ9UNT1 228 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 RFNGQ9Y644 331 aa13.82□□□□□ -0.2
TRAF4-216ENST00000586813 PRSS29PA6NIE9 313 aa13.81□□□□□ -0.2
TRAF4-216ENST00000586813 M0R2N4 97 aa13.81□□□□□ -0.2
TRAF4-216ENST00000586813 AKR1C4P17516 323 aa13.81□□□□□ -0.2
TRAF4-216ENST00000586813 ATP5IP56385 69 aaPredicted RBP13.81□□□□□ -0.2
TRAF4-216ENST00000586813 LYZP61626 148 aa13.81□□□□□ -0.2
TRAF4-216ENST00000586813 GPR141Q7Z602 305 aa13.81□□□□□ -0.2
TRAF4-216ENST00000586813 MCUBQ9NWR8 336 aa13.81□□□□□ -0.2
TRAF4-216ENST00000586813 DKK2Q9UBU2 259 aa13.81□□□□□ -0.2
TRAF4-216ENST00000586813 DYNC1H1Q14204 4646 aaKnown RBP13.8□□□□□ -0.2
TRAF4-216ENST00000586813 TEX48A0A1B0GUV7 120 aa13.8□□□□□ -0.2
TRAF4-216ENST00000586813 FABP1P07148 127 aa13.8□□□□□ -0.2
TRAF4-216ENST00000586813 SRPXP78539 464 aa13.8□□□□□ -0.2
TRAF4-216ENST00000586813 ZNF79Q15937 498 aa13.8□□□□□ -0.2
TRAF4-216ENST00000586813 OR4B1Q8NGF8 309 aa13.8□□□□□ -0.2
TRAF4-216ENST00000586813 OR1S1Q8NH92 325 aa13.8□□□□□ -0.2
TRAF4-216ENST00000586813 MRPS26Q9BYN8 205 aaKnown RBP13.8□□□□□ -0.2
TRAF4-216ENST00000586813 SLC35B3Q9H1N7 401 aa13.8□□□□□ -0.2
TRAF4-216ENST00000586813 ISLRO14498 428 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms