RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 EIF4EBP1Q13541 118 aaPredicted RBP13.11□□□□□ -0.31
TOP3A-220ENST00000585031 RRNAD1Q96FB5 475 aaKnown RBP13.11□□□□□ -0.31
TOP3A-220ENST00000585031 CXorf58Q96LI9 332 aa13.11□□□□□ -0.31
TOP3A-220ENST00000585031 RNF2Q99496 336 aa13.11□□□□□ -0.31
TOP3A-220ENST00000585031 CHRDL1Q9BU40 450 aa13.11□□□□□ -0.31
TOP3A-220ENST00000585031 DAZ1Q9NQZ3 744 aaKnown RBP13.11□□□□□ -0.31
TOP3A-220ENST00000585031 LSM5Q9Y4Y9 91 aaKnown RBP13.11□□□□□ -0.31
TOP3A-220ENST00000585031 A0A1B0GU03 582 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 OR2T8A6NH00 312 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 DEFA4P12838 97 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 PVALBP20472 110 aaPredicted RBP13.1□□□□□ -0.31
TOP3A-220ENST00000585031 ADMP35318 185 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 TFPI2P48307 235 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 AKR1C2P52895 323 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 NDUFA5Q16718 116 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 LGALS9BQ3B8N2 356 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 FAM219AQ8IW50 185 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 POM121L12Q8N7R1 296 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 RNF126Q9BV68 326 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 HRH4Q9H3N8 390 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 PRELID3BQ9Y3B1 194 aa13.1□□□□□ -0.31
TOP3A-220ENST00000585031 IGLC7A0M8Q6 106 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 E5RGE8 158 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 BCL2L11O43521 198 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 CA1P00915 261 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-220ENST00000585031 GIG44P09565 113 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-220ENST00000585031 MAS1LP35410 378 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 LPAR6P43657 344 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 NKX2-1P43699 371 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-220ENST00000585031 AP2S1P53680 142 aaPredicted RBP13.09□□□□□ -0.31
TOP3A-220ENST00000585031 SLC51BQ86UW2 128 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 SPAG16Q8N0X2 631 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 MAPKAPK5-AS1Q8N8E1 139 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 OR4D5Q8NGN0 318 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 OR1S1Q8NH92 325 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 PLEKHA2Q9HB19 425 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 NSG2Q9Y328 171 aa13.09□□□□□ -0.31
TOP3A-220ENST00000585031 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 IGHV4-28A0A0C4DH34 117 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 RNF222A6NCQ9 220 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 F8W735 103 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-220ENST00000585031 H0YIZ8 118 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 K7EPK0 472 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 WRBO00258 174 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 MBPP02686 304 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-220ENST00000585031 OR2B8PP59922 312 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 TEX261Q6UWH6 196 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 AQP10Q96PS8 301 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 C20orf24Q9BUV8 137 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 OR5AC2Q9NZP5 309 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 U3KQ87 197 aa13.08□□□□□ -0.32
TOP3A-220ENST00000585031 IGKV3-7A0A075B6H7 116 aa13.07□□□□□ -0.32
TOP3A-220ENST00000585031 ELOA3CA0A087WX78 387 aaPredicted RBP13.07□□□□□ -0.32
TOP3A-220ENST00000585031 IGHV3-21A0A0B4J1V1 117 aa13.07□□□□□ -0.32
TOP3A-220ENST00000585031 RBFOX2O43251 390 aaKnown RBP eCLIP13.07□□□□□ -0.32
TOP3A-220ENST00000585031 RPL8P62917 257 aaKnown RBP13.07□□□□□ -0.32
TOP3A-220ENST00000585031 PVRIGQ6DKI7 326 aa13.07□□□□□ -0.32
TOP3A-220ENST00000585031 GPR146Q96CH1 333 aa13.07□□□□□ -0.32
TOP3A-220ENST00000585031 ARPC5LQ9BPX5 153 aa13.07□□□□□ -0.32
TOP3A-220ENST00000585031 SMPXQ9UHP9 88 aa13.07□□□□□ -0.32
TOP3A-220ENST00000585031 IGHV3-49A0A0A0MS15 119 aa13.06□□□□□ -0.32
TOP3A-220ENST00000585031 TRAV10A0A0B4J240 114 aa13.06□□□□□ -0.32
TOP3A-220ENST00000585031 VAMP2P63027 116 aa13.06□□□□□ -0.32
TOP3A-220ENST00000585031 GBGT1Q8N5D6 347 aa13.06□□□□□ -0.32
TOP3A-220ENST00000585031 ZNF680Q8NEM1 530 aa13.06□□□□□ -0.32
TOP3A-220ENST00000585031 OR10W1Q8NGF6 305 aa13.06□□□□□ -0.32
TOP3A-220ENST00000585031 VSTM2AQ8TAG5 236 aa13.06□□□□□ -0.32
TOP3A-220ENST00000585031 RCL1Q9Y2P8 373 aaKnown RBP13.06□□□□□ -0.32
TOP3A-220ENST00000585031 K7EMT4 169 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 NDUFA4O00483 81 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 CHEK1O14757 476 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 TAAR5O14804 337 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 IGKV1-39P01597 117 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 IGKV1D-39P04432 117 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 RPL12P30050 165 aaKnown RBP13.05□□□□□ -0.32
TOP3A-220ENST00000585031 P2RY1P47900 373 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 ERVK-16P61578 105 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 EIF5AP63241 154 aaKnown RBP13.05□□□□□ -0.32
TOP3A-220ENST00000585031 FAM90A2PQ658T7 463 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 Q6ZR54 194 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 Q8N1X5 172 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 OR4S2Q8NH73 311 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 CELA1Q9UNI1 258 aa13.05□□□□□ -0.32
TOP3A-220ENST00000585031 NACAE9PAV3 2078 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 FAM90A26D6RGX4 464 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 HPRT1P00492 218 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 IGKV1-5P01602 117 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 P0DMU3 169 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 FAM231AP0DMU4 169 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 FAM231CP0DMU5 169 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 VN1R17PQ8TDU5 208 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 RHPN1-AS1Q9BWJ2 59 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 ZNF471Q9BX82 626 aaPredicted RBP13.04□□□□□ -0.32
TOP3A-220ENST00000585031 CACNG5Q9UF02 275 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 X6R8D5 127 aa13.04□□□□□ -0.32
TOP3A-220ENST00000585031 IGLV2-18A0A075B6J9 118 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 IGHV3OR16-13A0A075B7E8 117 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 IGHV3-74A0A0B4J1X5 117 aa13.03□□□□□ -0.32
TOP3A-220ENST00000585031 IGHV7-4-1A0A0J9YVY3 117 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms