RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 GSKIPQ9P0R6 139 aa12.11□□□□□ -0.47
ERBB2-222ENST00000584908 ZFP92A6NM28 416 aa12.1□□□□□ -0.47
ERBB2-222ENST00000584908 PRAF2O60831 178 aa12.1□□□□□ -0.47
ERBB2-222ENST00000584908 DFFBO76075 338 aa12.1□□□□□ -0.47
ERBB2-222ENST00000584908 HNRNPCP07910 306 aaKnown RBP eCLIP12.1□□□□□ -0.47
ERBB2-222ENST00000584908 IL15RAQ13261 267 aa12.1□□□□□ -0.47
ERBB2-222ENST00000584908 NARS2Q96I59 477 aaKnown RBP12.1□□□□□ -0.47
ERBB2-222ENST00000584908 C2orf50Q96LR7 162 aa12.1□□□□□ -0.47
ERBB2-222ENST00000584908 CITED4Q96RK1 184 aa12.1□□□□□ -0.47
ERBB2-222ENST00000584908 ZMAT4Q9H898 229 aa12.1□□□□□ -0.47
ERBB2-222ENST00000584908 PAIP2BQ9ULR5 123 aaKnown RBP12.1□□□□□ -0.47
ERBB2-222ENST00000584908 C7orf66A4D0T2 115 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 SNRPGP15A8MWD9 76 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 SCGB1D2O95969 90 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 FABP1P07148 127 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 P2RY1P47900 373 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 ZNF90Q03938 601 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 RNF125Q96EQ8 232 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 RCHY1Q96PM5 261 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 C11orf1Q9H5F2 150 aa12.09□□□□□ -0.47
ERBB2-222ENST00000584908 GPN1Q9HCN4 374 aaPredicted RBP12.09□□□□□ -0.47
ERBB2-222ENST00000584908 IGHV3-66A0A0C4DH42 116 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 C5orf51A6NDU8 294 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 FNDC10F2Z333 226 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 INMT-MINDY4F8WBC2 141 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 CMC4P56277 68 aaPredicted RBP12.08□□□□□ -0.48
ERBB2-222ENST00000584908 PAFAH1B2P68402 229 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 OR8G2PQ6IF36 304 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 C16orf54Q6UWD8 224 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 ACOT7LQ6ZUV0 252 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 TMEM144Q7Z5S9 345 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 GLMPQ8WWB7 406 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 GRAMD2BQ96HH9 432 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 WWC2-AS2Q96NR7 200 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 SPATA25Q9BR10 227 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 MS4A6AQ9H2W1 248 aa12.08□□□□□ -0.48
ERBB2-222ENST00000584908 FAM25EA8MYX2 175 aa12.07□□□□□ -0.48
ERBB2-222ENST00000584908 K7EPK0 472 aa12.07□□□□□ -0.48
ERBB2-222ENST00000584908 BUB3O43684 328 aa12.07□□□□□ -0.48
ERBB2-222ENST00000584908 CFDP00746 253 aaPredicted RBP12.07□□□□□ -0.48
ERBB2-222ENST00000584908 DLK1P80370 383 aa12.07□□□□□ -0.48
ERBB2-222ENST00000584908 GSG1LQ6UXU4 331 aa12.07□□□□□ -0.48
ERBB2-222ENST00000584908 UBQLN2Q9UHD9 624 aa12.07□□□□□ -0.48
ERBB2-222ENST00000584908 RABAC1Q9UI14 185 aa12.07□□□□□ -0.48
ERBB2-222ENST00000584908 NUP62P37198 522 aaPredicted RBP12.06□□□□□ -0.48
ERBB2-222ENST00000584908 EIF2B2P49770 351 aaKnown RBP12.06□□□□□ -0.48
ERBB2-222ENST00000584908 GBGT1Q8N5D6 347 aa12.06□□□□□ -0.48
ERBB2-222ENST00000584908 GGTLC1Q9BX51 225 aa12.06□□□□□ -0.48
ERBB2-222ENST00000584908 IGKV3-7A0A075B6H7 116 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 LOC102724200A0A096LPH7 203 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-222ENST00000584908 HELTA6NFD8 242 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 K7EQG2 157 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 CCNKO75909 580 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 METTL15P1P0C7V9 234 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 AP2S1P53680 142 aaPredicted RBP12.05□□□□□ -0.48
ERBB2-222ENST00000584908 OR10P1Q8NGE3 313 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 DCANP1Q8TF63 244 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 GGACTQ9BVM4 153 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 MAP6D1Q9H9H5 199 aa12.05□□□□□ -0.48
ERBB2-222ENST00000584908 DNASE2O00115 360 aaPredicted RBP12.04□□□□□ -0.48
ERBB2-222ENST00000584908 TFPI2P48307 235 aa12.04□□□□□ -0.48
ERBB2-222ENST00000584908 AKR1C1Q04828 323 aa12.04□□□□□ -0.48
ERBB2-222ENST00000584908 PFDN2Q9UHV9 154 aa12.04□□□□□ -0.48
ERBB2-222ENST00000584908 SLC45A2Q9UMX9 530 aa12.04□□□□□ -0.48
ERBB2-222ENST00000584908 LSM5Q9Y4Y9 91 aaKnown RBP12.04□□□□□ -0.48
ERBB2-222ENST00000584908 L7N2F9 121 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 DEDDO75618 318 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 RPL11P62913 178 aaKnown RBP12.03□□□□□ -0.48
ERBB2-222ENST00000584908 VAMP2P63027 116 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 ARL16Q0P5N6 197 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 OR2F1Q13607 317 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 RAB32Q13637 225 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 C1orf194Q5T5A4 169 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 STPG3Q8N7X2 389 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 PBDC1Q9BVG4 233 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 NPVFQ9HCQ7 196 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 DNAH7Q8WXX0 4024 aa12.03□□□□□ -0.48
ERBB2-222ENST00000584908 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 PVALBP20472 110 aaPredicted RBP12.02□□□□□ -0.49
ERBB2-222ENST00000584908 LYZP61626 148 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 SIGLEC15Q6ZMC9 328 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 TMEM182Q6ZP80 229 aaPredicted RBP12.02□□□□□ -0.49
ERBB2-222ENST00000584908 APRG1Q8IVJ8 170 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 FAM24BQ8N5W8 94 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 BPIFCQ8NFQ6 507 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 STXBP6Q8NFX7 210 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 NMES1Q9C002 83 aa12.02□□□□□ -0.49
ERBB2-222ENST00000584908 SEPSECSQ9HD40 501 aaKnown RBP12.02□□□□□ -0.49
ERBB2-222ENST00000584908 LYRM2Q9NU23 88 aaPredicted RBP12.02□□□□□ -0.49
ERBB2-222ENST00000584908 SMCO3A2RU48 225 aa12.01□□□□□ -0.49
ERBB2-222ENST00000584908 PTTG1O95997 202 aa12.01□□□□□ -0.49
ERBB2-222ENST00000584908 PLP1P60201 277 aa12.01□□□□□ -0.49
ERBB2-222ENST00000584908 RRAS2P62070 204 aaPredicted RBP12.01□□□□□ -0.49
ERBB2-222ENST00000584908 SELENOTP62341 195 aa12.01□□□□□ -0.49
ERBB2-222ENST00000584908 CYP2G1PQ6ZSU1 146 aa12.01□□□□□ -0.49
ERBB2-222ENST00000584908 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
ERBB2-222ENST00000584908 NRN1Q9NPD7 142 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms