RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 GLMPQ8WWB7 406 aa13.15□□□□□ -0.3
ERBB2-221ENST00000584888 SLC35E1Q96K37 410 aa13.15□□□□□ -0.3
ERBB2-221ENST00000584888 TBC1D24Q9ULP9 559 aa13.15□□□□□ -0.3
ERBB2-221ENST00000584888 AGRNO00468 2067 aa13.15□□□□□ -0.3
ERBB2-221ENST00000584888 LYSTQ99698 3801 aa13.15□□□□□ -0.3
ERBB2-221ENST00000584888 DNAH1Q9P2D7 4330 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 IGKV1OR2-108A0A075B7D4 117 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 K7EQG2 157 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 UBE2CO00762 179 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 APOC4P55056 127 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 POLR2GP62487 172 aaKnown RBP eCLIP13.14□□□□□ -0.31
ERBB2-221ENST00000584888 RPP30P78346 268 aaKnown RBP13.14□□□□□ -0.31
ERBB2-221ENST00000584888 ZNF90Q03938 601 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 Q6ZWC4 215 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 WFDC3Q8IUB2 231 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 FAM24BQ8N5W8 94 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 TRGV9Q99603 122 aa13.14□□□□□ -0.31
ERBB2-221ENST00000584888 DNASE2O00115 360 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-221ENST00000584888 SPRY2O43597 315 aa13.13□□□□□ -0.31
ERBB2-221ENST00000584888 BUB3O43684 328 aa13.13□□□□□ -0.31
ERBB2-221ENST00000584888 NKX2-1P43699 371 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-221ENST00000584888 PAX9P55771 341 aa13.13□□□□□ -0.31
ERBB2-221ENST00000584888 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
ERBB2-221ENST00000584888 DCANP1Q8TF63 244 aa13.13□□□□□ -0.31
ERBB2-221ENST00000584888 NARS2Q96I59 477 aaKnown RBP13.13□□□□□ -0.31
ERBB2-221ENST00000584888 SMIM8Q96KF7 97 aa13.13□□□□□ -0.31
ERBB2-221ENST00000584888 TP53TG1Q9Y2A0 90 aa13.13□□□□□ -0.31
ERBB2-221ENST00000584888 PMS2P5A8MQ11 134 aa13.12□□□□□ -0.31
ERBB2-221ENST00000584888 RPL11P62913 178 aaKnown RBP13.12□□□□□ -0.31
ERBB2-221ENST00000584888 ASAH1Q13510 395 aa13.12□□□□□ -0.31
ERBB2-221ENST00000584888 SPANXN5Q5MJ07 72 aa13.12□□□□□ -0.31
ERBB2-221ENST00000584888 ZBTB8BQ8NAP8 495 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-221ENST00000584888 RNF125Q96EQ8 232 aa13.12□□□□□ -0.31
ERBB2-221ENST00000584888 GRAMD2BQ96HH9 432 aa13.12□□□□□ -0.31
ERBB2-221ENST00000584888 PTTG2Q9NZH5 202 aa13.12□□□□□ -0.31
ERBB2-221ENST00000584888 STRAPQ9Y3F4 350 aaKnown RBP13.12□□□□□ -0.31
ERBB2-221ENST00000584888 TRAV6A0A075B6T7 132 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 A0A0J9YWU9 116 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 ZFP92A6NM28 416 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 RPL35AP18077 110 aaKnown RBP13.11□□□□□ -0.31
ERBB2-221ENST00000584888 DEFB131AP59861 70 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 IAH1Q2TAA2 248 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-221ENST00000584888 DEFB135Q30KP9 77 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 OR8G2PQ6IF36 304 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 STPG3Q8N7X2 389 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 NUDT15Q9NV35 164 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 RABAC1Q9UI14 185 aa13.11□□□□□ -0.31
ERBB2-221ENST00000584888 PAIP2BQ9ULR5 123 aaKnown RBP13.11□□□□□ -0.31
ERBB2-221ENST00000584888 HELTA6NFD8 242 aa13.1□□□□□ -0.31
ERBB2-221ENST00000584888 H3BP45 60 aa13.1□□□□□ -0.31
ERBB2-221ENST00000584888 H2AFB2P0C5Z0 115 aa13.1□□□□□ -0.31
ERBB2-221ENST00000584888 EIF2B2P49770 351 aaKnown RBP13.1□□□□□ -0.31
ERBB2-221ENST00000584888 EWSR1Q01844 656 aaKnown RBP eCLIP13.1□□□□□ -0.31
ERBB2-221ENST00000584888 STXBP6Q8NFX7 210 aa13.1□□□□□ -0.31
ERBB2-221ENST00000584888 ZNF431Q8TF32 576 aaPredicted RBP13.1□□□□□ -0.31
ERBB2-221ENST00000584888 RNF183Q96D59 192 aa13.1□□□□□ -0.31
ERBB2-221ENST00000584888 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
ERBB2-221ENST00000584888 PSENENQ9NZ42 101 aa13.1□□□□□ -0.31
ERBB2-221ENST00000584888 CXorf65A6NEN9 183 aa13.09□□□□□ -0.31
ERBB2-221ENST00000584888 SSSCA1O60232 199 aa13.09□□□□□ -0.31
ERBB2-221ENST00000584888 AP2S1P53680 142 aaPredicted RBP13.09□□□□□ -0.31
ERBB2-221ENST00000584888 TAS2R30P59541 319 aa13.09□□□□□ -0.31
ERBB2-221ENST00000584888 IFITM3Q01628 133 aa13.09□□□□□ -0.31
ERBB2-221ENST00000584888 TMEM14EPQ6UXP3 125 aa13.09□□□□□ -0.31
ERBB2-221ENST00000584888 WDR12Q9GZL7 423 aaKnown RBP13.09□□□□□ -0.31
ERBB2-221ENST00000584888 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
ERBB2-221ENST00000584888 RCL1Q9Y2P8 373 aaKnown RBP13.09□□□□□ -0.31
ERBB2-221ENST00000584888 FAM240BA0A1B0GVZ2 78 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 SNRPGP15A8MWD9 76 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 UPK1BO75841 260 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 MBPP02686 304 aaPredicted RBP13.08□□□□□ -0.32
ERBB2-221ENST00000584888 FABP1P07148 127 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 PMS2P11Q13670 270 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 ZNF846Q147U1 533 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 MZT2BQ6NZ67 158 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 TMEM144Q7Z5S9 345 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 RAB40CQ96S21 281 aa13.08□□□□□ -0.32
ERBB2-221ENST00000584888 SEPSECSQ9HD40 501 aaKnown RBP13.08□□□□□ -0.32
ERBB2-221ENST00000584888 CCSO14618 274 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 CCNKO75909 580 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 NUP62P37198 522 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-221ENST00000584888 OR2F1Q13607 317 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 LEMD1Q68G75 181 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 SIGLEC15Q6ZMC9 328 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 TMEM182Q6ZP80 229 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-221ENST00000584888 ACOT7LQ6ZUV0 252 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 C12orf45Q8N5I9 185 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-221ENST00000584888 PBDC1Q9BVG4 233 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 GSKIPQ9P0R6 139 aa13.07□□□□□ -0.32
ERBB2-221ENST00000584888 TSC22D2O75157 780 aa13.06□□□□□ -0.32
ERBB2-221ENST00000584888 CFDP00746 253 aaPredicted RBP13.06□□□□□ -0.32
ERBB2-221ENST00000584888 IL5P05113 134 aa13.06□□□□□ -0.32
ERBB2-221ENST00000584888 ZNF688P0C7X2 276 aa13.06□□□□□ -0.32
ERBB2-221ENST00000584888 IL15RAQ13261 267 aa13.06□□□□□ -0.32
ERBB2-221ENST00000584888 C1orf194Q5T5A4 169 aa13.06□□□□□ -0.32
ERBB2-221ENST00000584888 LINC00476Q8WZB0 136 aa13.06□□□□□ -0.32
ERBB2-221ENST00000584888 C11orf1Q9H5F2 150 aa13.06□□□□□ -0.32
ERBB2-221ENST00000584888 NRN1Q9NPD7 142 aa13.06□□□□□ -0.32
ERBB2-221ENST00000584888 EPPK1P58107 5090 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms