RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 DEFA3P59666 94 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 POLR2GP62487 172 aaKnown RBP eCLIP7.51□□□□□ -1.21
GGA3-219ENST00000584550 TIGITQ495A1 244 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 NRARPQ7Z6K4 114 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 C12orf45Q8N5I9 185 aaPredicted RBP7.51□□□□□ -1.21
GGA3-219ENST00000584550 OR4X1Q8NH49 305 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 RNASEH2CQ8TDP1 164 aaKnown RBP7.51□□□□□ -1.21
GGA3-219ENST00000584550 NPIPB3Q92617 1050 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 OR10C1Q96KK4 312 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 DAZ1Q9NQZ3 744 aaKnown RBP7.51□□□□□ -1.21
GGA3-219ENST00000584550 IGHV3OR16-13A0A075B7E8 117 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 IGHV3-74A0A0B4J1X5 117 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 C5orf51A6NDU8 294 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 C15orf62A8K5M9 175 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 H3BP45 60 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 M0R2N4 97 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 UBE2CO00762 179 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 DEFB4AO15263 64 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 SSSCA1O60232 199 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 SCGB2A1O75556 95 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 SLC25A4P12235 298 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 ELLP55199 621 aaPredicted RBP7.5□□□□□ -1.21
GGA3-219ENST00000584550 RAB11AP62491 216 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 RPP30P78346 268 aaKnown RBP7.5□□□□□ -1.21
GGA3-219ENST00000584550 SPANXN5Q5MJ07 72 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 ETFRF1Q6IPR1 90 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 PRSS54Q6PEW0 395 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 TOMM20LQ6UXN7 152 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 RBPMS2Q6ZRY4 209 aaKnown RBP7.5□□□□□ -1.21
GGA3-219ENST00000584550 ZNF575Q86XF7 245 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 ZBTB8BQ8NAP8 495 aaPredicted RBP7.5□□□□□ -1.21
GGA3-219ENST00000584550 OR4D5Q8NGN0 318 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 MARC2Q969Z3 335 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 CIB3Q96Q77 187 aaPredicted RBP7.5□□□□□ -1.21
GGA3-219ENST00000584550 MRPL27Q9P0M9 148 aaKnown RBP7.5□□□□□ -1.21
GGA3-219ENST00000584550 APLNQ9ULZ1 77 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 PUS1Q9Y606 427 aaKnown RBP eCLIP7.5□□□□□ -1.21
GGA3-219ENST00000584550 HSPG2P98160 4391 aa7.5□□□□□ -1.21
GGA3-219ENST00000584550 HERC1Q15751 4861 aa7.49□□□□□ -1.21
GGA3-219ENST00000584550 OR10J1P30954 320 aa7.49□□□□□ -1.21
GGA3-219ENST00000584550 ID3Q02535 119 aa7.49□□□□□ -1.21
GGA3-219ENST00000584550 ZNF600Q6ZNG1 722 aa7.49□□□□□ -1.21
GGA3-219ENST00000584550 ZNF414Q96IQ9 312 aa7.49□□□□□ -1.21
GGA3-219ENST00000584550 SLC35E1Q96K37 410 aa7.49□□□□□ -1.21
GGA3-219ENST00000584550 MFFQ9GZY8 342 aa7.49□□□□□ -1.21
GGA3-219ENST00000584550 GPN1Q9HCN4 374 aaPredicted RBP7.49□□□□□ -1.21
GGA3-219ENST00000584550 PSENENQ9NZ42 101 aa7.49□□□□□ -1.21
GGA3-219ENST00000584550 IGKV3-7A0A075B6H7 116 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 TRAV30A0A087WSZ9 112 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 TRAV14DV4A0A0A6YYC5 116 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 IGHV3-66A0A0C4DH42 116 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 IGHV7-4-1A0A0J9YVY3 117 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 INMT-MINDY4F8WBC2 141 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 K7EMT4 169 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 RTL8CO15255 209 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 IGKV1-17P01599 117 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 IL5P05113 134 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 C8orf88P0DMB2 117 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 ATP5IP56385 69 aaPredicted RBP7.48□□□□□ -1.21
GGA3-219ENST00000584550 GAMTQ14353 236 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 TMEM116Q8NCL8 245 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 OR1S2Q8NGQ3 325 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 RARRES2Q99969 163 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 GINS3Q9BRX5 216 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 RHPN1-AS1Q9BWJ2 59 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 SMPXQ9UHP9 88 aa7.48□□□□□ -1.21
GGA3-219ENST00000584550 STRAPQ9Y3F4 350 aaKnown RBP7.48□□□□□ -1.21
GGA3-219ENST00000584550 LSM5Q9Y4Y9 91 aaKnown RBP7.48□□□□□ -1.21
GGA3-219ENST00000584550 KIR2DL5BA0A0G2JN68 375 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 KIR2DL5BA0A0G2JPC4 375 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 ZFP92A6NM28 416 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 CHEK1O14757 476 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 MBPP02686 304 aaPredicted RBP7.47□□□□□ -1.21
GGA3-219ENST00000584550 APOHP02749 345 aaPredicted RBP7.47□□□□□ -1.21
GGA3-219ENST00000584550 IGLC1P0CG04 106 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 GPX4P36969 197 aaPredicted RBP7.47□□□□□ -1.21
GGA3-219ENST00000584550 TCTAP57738 103 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 LAMTOR1Q6IAA8 161 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 OR8G2PQ6IF36 304 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 GSG1LQ6UXU4 331 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 KIR2DL5AQ8N109 375 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 KIR2DL5BQ8NHK3 375 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 Q8WTZ3 238 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 MAP6D1Q9H9H5 199 aa7.47□□□□□ -1.21
GGA3-219ENST00000584550 RCL1Q9Y2P8 373 aaKnown RBP7.47□□□□□ -1.21
GGA3-219ENST00000584550 SMCO3A2RU48 225 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 L7N2F9 121 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 GOSR2O14653 212 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 SIX6O95475 246 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 RD3LP0DJH9 198 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 NPPCP23582 126 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 TFPI2P48307 235 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 BCAP31P51572 246 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 S100A10P60903 97 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 RPL11P62913 178 aaKnown RBP7.46□□□□□ -1.22
GGA3-219ENST00000584550 VAMP2P63027 116 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 OR2F1Q13607 317 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 APRG1Q8IVJ8 170 aa7.46□□□□□ -1.22
GGA3-219ENST00000584550 GBGT1Q8N5D6 347 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms