RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 PMS2P5A8MQ11 134 aa18.45■□□□□ 0.54
TTC39C-209ENST00000584250 FAM25EA8MYX2 175 aa18.45■□□□□ 0.54
TTC39C-209ENST00000584250 OR2F1Q13607 317 aa18.45■□□□□ 0.54
TTC39C-209ENST00000584250 APRG1Q8IVJ8 170 aa18.45■□□□□ 0.54
TTC39C-209ENST00000584250 ENKURQ8TC29 256 aa18.45■□□□□ 0.54
TTC39C-209ENST00000584250 SMIM8Q96KF7 97 aa18.45■□□□□ 0.54
TTC39C-209ENST00000584250 MS4A6AQ9H2W1 248 aa18.45■□□□□ 0.54
TTC39C-209ENST00000584250 RPL11P62913 178 aaKnown RBP18.44■□□□□ 0.54
TTC39C-209ENST00000584250 RPP30P78346 268 aaKnown RBP18.44■□□□□ 0.54
TTC39C-209ENST00000584250 FAM110AQ9BQ89 295 aa18.44■□□□□ 0.54
TTC39C-209ENST00000584250 HNRNPCP07910 306 aaKnown RBP eCLIP18.43■□□□□ 0.54
TTC39C-209ENST00000584250 OR8G2PQ6IF36 304 aa18.43■□□□□ 0.54
TTC39C-209ENST00000584250 ACOT7LQ6ZUV0 252 aa18.43■□□□□ 0.54
TTC39C-209ENST00000584250 THAP8Q8NA92 274 aa18.43■□□□□ 0.54
TTC39C-209ENST00000584250 SPATA25Q9BR10 227 aa18.43■□□□□ 0.54
TTC39C-209ENST00000584250 A0A1W2PS18 150 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 C5orf51A6NDU8 294 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 IL5P05113 134 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 BMI1P35226 326 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 C16orf54Q6UWD8 224 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 TMEM182Q6ZP80 229 aaPredicted RBP18.42■□□□□ 0.54
TTC39C-209ENST00000584250 STPG3Q8N7X2 389 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 GLMPQ8WWB7 406 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 RNF125Q96EQ8 232 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 PBDC1Q9BVG4 233 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 MAP6D1Q9H9H5 199 aa18.42■□□□□ 0.54
TTC39C-209ENST00000584250 C7orf66A4D0T2 115 aa18.41■□□□□ 0.54
TTC39C-209ENST00000584250 METTL15P1P0C7V9 234 aa18.41■□□□□ 0.54
TTC39C-209ENST00000584250 TMEM14EPQ6UXP3 125 aa18.41■□□□□ 0.54
TTC39C-209ENST00000584250 TRGV9Q99603 122 aa18.41■□□□□ 0.54
TTC39C-209ENST00000584250 GGTLC1Q9BX51 225 aa18.41■□□□□ 0.54
TTC39C-209ENST00000584250 TMEM231Q9H6L2 316 aa18.41■□□□□ 0.54
TTC39C-209ENST00000584250 RABAC1Q9UI14 185 aa18.41■□□□□ 0.54
TTC39C-209ENST00000584250 LOC102724200A0A096LPH7 203 aaPredicted RBP18.4■□□□□ 0.54
TTC39C-209ENST00000584250 GATA2P23769 480 aaPredicted RBP18.4■□□□□ 0.54
TTC39C-209ENST00000584250 ARL16Q0P5N6 197 aa18.4■□□□□ 0.54
TTC39C-209ENST00000584250 STXBP6Q8NFX7 210 aa18.4■□□□□ 0.54
TTC39C-209ENST00000584250 RAB40CQ96S21 281 aa18.4■□□□□ 0.54
TTC39C-209ENST00000584250 LSM5Q9Y4Y9 91 aaKnown RBP18.4■□□□□ 0.54
TTC39C-209ENST00000584250 K7EPK0 472 aa18.39■□□□□ 0.53
TTC39C-209ENST00000584250 DNASE2O00115 360 aaPredicted RBP18.39■□□□□ 0.53
TTC39C-209ENST00000584250 BUB3O43684 328 aa18.39■□□□□ 0.53
TTC39C-209ENST00000584250 RPL35AP18077 110 aaKnown RBP18.39■□□□□ 0.53
TTC39C-209ENST00000584250 LYZP61626 148 aa18.39■□□□□ 0.53
TTC39C-209ENST00000584250 RRAS2P62070 204 aaPredicted RBP18.39■□□□□ 0.53
TTC39C-209ENST00000584250 IL15RAQ13261 267 aa18.39■□□□□ 0.53
TTC39C-209ENST00000584250 GSG1LQ6UXU4 331 aa18.39■□□□□ 0.53
TTC39C-209ENST00000584250 C2orf50Q96LR7 162 aa18.39■□□□□ 0.53
TTC39C-209ENST00000584250 C11orf1Q9H5F2 150 aa18.39■□□□□ 0.53
TTC39C-209ENST00000584250 K7EQG2 157 aa18.38■□□□□ 0.53
TTC39C-209ENST00000584250 CD5P06127 495 aa18.38■□□□□ 0.53
TTC39C-209ENST00000584250 PAFAH1B2P68402 229 aa18.38■□□□□ 0.53
TTC39C-209ENST00000584250 AKR1C1Q04828 323 aa18.38■□□□□ 0.53
TTC39C-209ENST00000584250 NARS2Q96I59 477 aaKnown RBP18.38■□□□□ 0.53
TTC39C-209ENST00000584250 SMCO3A2RU48 225 aa18.37■□□□□ 0.53
TTC39C-209ENST00000584250 INMT-MINDY4F8WBC2 141 aa18.37■□□□□ 0.53
TTC39C-209ENST00000584250 SIX6O95475 246 aa18.37■□□□□ 0.53
TTC39C-209ENST00000584250 DEFB131AP59861 70 aa18.37■□□□□ 0.53
TTC39C-209ENST00000584250 LEMD1Q68G75 181 aa18.37■□□□□ 0.53
TTC39C-209ENST00000584250 DCANP1Q8TF63 244 aa18.37■□□□□ 0.53
TTC39C-209ENST00000584250 GRAMD2BQ96HH9 432 aa18.37■□□□□ 0.53
TTC39C-209ENST00000584250 TSC22D2O75157 780 aa18.36■□□□□ 0.53
TTC39C-209ENST00000584250 EIF2B2P49770 351 aaKnown RBP18.36■□□□□ 0.53
TTC39C-209ENST00000584250 TAS2R30P59541 319 aa18.36■□□□□ 0.53
TTC39C-209ENST00000584250 TRAV2A0A0B4J234 112 aa18.35■□□□□ 0.53
TTC39C-209ENST00000584250 SNRPGP15A8MWD9 76 aa18.35■□□□□ 0.53
TTC39C-209ENST00000584250 TMEM144Q7Z5S9 345 aa18.35■□□□□ 0.53
TTC39C-209ENST00000584250 MARVELD1Q9BSK0 173 aa18.35■□□□□ 0.53
TTC39C-209ENST00000584250 EDA2RQ9HAV5 297 aa18.35■□□□□ 0.53
TTC39C-209ENST00000584250 AGRNO00468 2067 aa18.35■□□□□ 0.53
TTC39C-209ENST00000584250 ZNF688P0C7X2 276 aa18.34■□□□□ 0.53
TTC39C-209ENST00000584250 DLK1P80370 383 aa18.34■□□□□ 0.53
TTC39C-209ENST00000584250 RAB32Q13637 225 aa18.34■□□□□ 0.53
TTC39C-209ENST00000584250 GPN1Q9HCN4 374 aaPredicted RBP18.34■□□□□ 0.53
TTC39C-209ENST00000584250 FAM24AA6NFZ4 105 aa18.33■□□□□ 0.52
TTC39C-209ENST00000584250 S100A10P60903 97 aa18.33■□□□□ 0.52
TTC39C-209ENST00000584250 OVOL2Q9BRP0 275 aa18.33■□□□□ 0.52
TTC39C-209ENST00000584250 L7N2F9 121 aa18.32■□□□□ 0.52
TTC39C-209ENST00000584250 GOSR2O14653 212 aa18.32■□□□□ 0.52
TTC39C-209ENST00000584250 FABP1P07148 127 aa18.32■□□□□ 0.52
TTC39C-209ENST00000584250 DEFA1P59665 94 aa18.32■□□□□ 0.52
TTC39C-209ENST00000584250 DEFA3P59666 94 aa18.32■□□□□ 0.52
TTC39C-209ENST00000584250 VAMP2P63027 116 aa18.32■□□□□ 0.52
TTC39C-209ENST00000584250 SIGLEC15Q6ZMC9 328 aa18.32■□□□□ 0.52
TTC39C-209ENST00000584250 OR10P1Q8NGE3 313 aa18.32■□□□□ 0.52
TTC39C-209ENST00000584250 HELTA6NFD8 242 aa18.31■□□□□ 0.52
TTC39C-209ENST00000584250 CMC4P56277 68 aaPredicted RBP18.31■□□□□ 0.52
TTC39C-209ENST00000584250 CYP2G1PQ6ZSU1 146 aa18.31■□□□□ 0.52
TTC39C-209ENST00000584250 PRAF2O60831 178 aa18.3■□□□□ 0.52
TTC39C-209ENST00000584250 CST7O76096 145 aa18.3■□□□□ 0.52
TTC39C-209ENST00000584250 BCAP31P51572 246 aa18.3■□□□□ 0.52
TTC39C-209ENST00000584250 CAV2P51636 162 aa18.3■□□□□ 0.52
TTC39C-209ENST00000584250 DEFB135Q30KP9 77 aa18.3■□□□□ 0.52
TTC39C-209ENST00000584250 DOK5Q9P104 306 aa18.3■□□□□ 0.52
TTC39C-209ENST00000584250 KNCNA6PVL3 124 aa18.29■□□□□ 0.52
TTC39C-209ENST00000584250 ORM2P19652 201 aa18.29■□□□□ 0.52
TTC39C-209ENST00000584250 BPIFCQ8NFQ6 507 aa18.29■□□□□ 0.52
TTC39C-209ENST00000584250 NRN1Q9NPD7 142 aa18.29■□□□□ 0.52
TTC39C-209ENST00000584250 IGSF23A1L1A6 192 aa18.28■□□□□ 0.52
TTC39C-209ENST00000584250 APOC4P55056 127 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms