RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 MOB3BQ86TA1 216 aa9.46□□□□□ -0.89
CDK5RAP3-231ENST00000584063 TBX15Q96SF7 602 aa9.46□□□□□ -0.89
CDK5RAP3-231ENST00000584063 MAP1LC3AQ9H492 121 aa9.46□□□□□ -0.89
CDK5RAP3-231ENST00000584063 POLDIP2Q9Y2S7 368 aa9.46□□□□□ -0.89
CDK5RAP3-231ENST00000584063 PROP1O75360 226 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 CLDN14O95500 239 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 GATA2P23769 480 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 C22orf34Q6ZV56 151 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 IL17RELQ6ZVW7 336 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 GTF2H5Q6ZYL4 71 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 CD177Q8N6Q3 437 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ZNRF1Q8ND25 227 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TMEM170AQ8WVE7 144 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 FAM103A1Q9BTL3 118 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ZNRD1Q9P1U0 126 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 RALYQ9UKM9 306 aaKnown RBP9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 IQCF6A8MYZ5 107 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TEX22C9J3V5 150 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 M0R1X1 148 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 F2RL2O00254 374 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ADMP35318 185 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 RHOBP62745 196 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 GUSBP1Q15486 140 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MBD3L2Q8NHZ7 208 aaPredicted RBP9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 FAM57AQ8TBR7 257 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 WIPI2Q9Y4P8 454 aa9.46□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ASH1LQ9NR48 2969 aaKnown RBP9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TRGV8A0A0C4DH27 118 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 CATR1Q13166 79 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 Q8TCH9 128 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 C1QTNF4Q9BXJ3 329 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MANBALQ9NQG1 85 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TMEM250H0YL14 139 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 CGAP01215 116 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TIGITQ495A1 244 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ACP7Q6ZNF0 438 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 C1orf229Q6ZS94 237 aaPredicted RBP9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TMEM18Q96B42 140 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 PYGO2Q9BRQ0 406 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ANAPC13Q9BS18 74 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 FKBP11Q9NYL4 201 aa9.45□□□□□ -0.9
CDK5RAP3-231ENST00000584063 IGHV1-18A0A0C4DH31 117 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 NPIPB11E5RHQ5 1161 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 PRB4P10163 310 aaPredicted RBP9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 RPL35AP18077 110 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 RPL7P18124 248 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ZNF134P52741 427 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TGIF2LYQ8IUE0 185 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 PNKDQ8N490 385 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 Q8N7P7 452 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 OR5B3Q8NH48 314 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 LRRC29Q8WV35 223 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MS4A10Q96PG2 267 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 YTHDF2Q9Y5A9 579 aaKnown RBP9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 EPG5Q9HCE0 2579 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 NAV3Q8IVL0 2385 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 GAGE12HA6NDE8 117 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 IGKV3-15P01624 115 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 IGHV3-48P01763 117 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MLANAQ16655 118 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 C4orf26Q17RF5 130 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ACOT6Q3I5F7 207 aaPredicted RBP9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 FAM159AQ6UWV7 190 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MOB1BQ7L9L4 216 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 DEFB108BQ8NET1 73 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 PAM16Q9Y3D7 125 aa9.44□□□□□ -0.9
CDK5RAP3-231ENST00000584063 A0A0G2JNJ9 132 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 HSD52Q0P140 79 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 FXYD3Q14802 87 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TREML4Q6UXN2 200 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 FA2HQ7L5A8 372 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 OR1B1Q8NGR6 318 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TIMD4Q96H15 378 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 LINC00477Q96M19 166 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 DUX3Q96PT4 197 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 HES4Q9HCC6 221 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ZNF586Q9NXT0 402 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 Q9UFV3 132 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MYO18BQ8IUG5 2567 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 A0A0G2JLM5 398 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 NTF3P20783 257 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 IER3P46695 156 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 EIF4EBP1Q13541 118 aaPredicted RBP9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MGST2Q99735 147 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 AGMATQ9BSE5 352 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 PKIGQ9Y2B9 76 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 PXMP4Q9Y6I8 212 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MED13LQ71F56 2210 aa9.43□□□□□ -0.9
CDK5RAP3-231ENST00000584063 SVEP1Q4LDE5 3571 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 HIVEP3Q5T1R4 2406 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 MDFIC2A0A1B0GVS7 189 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 P0C879 139 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ZNF90Q03938 601 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 LY6DQ14210 128 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 ZNF418Q8TF45 676 aaPredicted RBP9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 FBXL7Q9UJT9 491 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 SIGLEC9Q9Y336 463 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 KBTBD11-OT1A0A1B0GTJ5 212 aa9.42□□□□□ -0.9
CDK5RAP3-231ENST00000584063 C17orf112F2Z3M2 114 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms