RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 GGCTO75223 188 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 IFNA7P01567 189 aa12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 MBP02144 154 aa12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 RD3LP0DJH9 198 aa12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ALKAL2Q6UX46 152 aa12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 TMEM182Q6ZP80 229 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 OR5B12Q96R08 314 aa12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 C19orf24Q9BVV8 132 aa12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 RFNGQ9Y644 331 aa12.88□□□□□ -0.35
CDK5RAP3-230ENST00000584042 SETD2Q9BYW2 2564 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ANKRD34BA5PLL1 514 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 NUDT19A8MXV4 375 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 YIF1AO95070 293 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 HSPB1P04792 205 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 GATA2P23769 480 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ACOT6Q3I5F7 207 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 AKR1C8PQ5T2L2 129 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 Q6ZRG5 221 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 NDUFA11Q86Y39 141 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 C11orf44Q8N8P7 122 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ZNF680Q8NEM1 530 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 Q8WTZ3 238 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 RNF125Q96EQ8 232 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 PFDN5Q99471 154 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ZFAND3Q9H8U3 227 aa12.87□□□□□ -0.35
CDK5RAP3-230ENST00000584042 IGHV4OR15-8A0A075B7B6 117 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 A0A087WW49 117 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 NDUFA4O00483 81 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 IL4P05112 153 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 M6PRP20645 277 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 SULT1A2P50226 295 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 RAB5CP51148 216 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 KRTAP10-3P60369 221 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 IFITM2Q01629 132 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 TMEM41BQ5BJD5 291 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 DPPA3Q6W0C5 159 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 C18orf65Q6ZTR6 163 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ZNF767PQ75MW2 155 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 OR1L4Q8NGR5 311 aa12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 PUS1Q9Y606 427 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDK5RAP3-230ENST00000584042 WI2-2373I1.2A0A1W2PRP0 233 aa12.85□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ZP3P21754 424 aa12.85□□□□□ -0.35
CDK5RAP3-230ENST00000584042 LYZP61626 148 aa12.85□□□□□ -0.35
CDK5RAP3-230ENST00000584042 TMEM190Q8WZ59 177 aa12.85□□□□□ -0.35
CDK5RAP3-230ENST00000584042 UBQLN2Q9UHD9 624 aa12.85□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ATRQ13535 2644 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ELOA3CA0A087WX78 387 aaPredicted RBP12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 ADARB2-AS1A8MUL3 147 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 LINC01619G3V211 115 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 RGS13O14921 159 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 COX7A2P2O60397 106 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 RAB2AP61019 212 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 FHL3Q13643 280 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 RPEL1Q2QD12 228 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 FAM74A1Q5RGS3 127 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 TOMM20LQ6UXN7 152 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 C8orf86Q6ZUL3 223 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 GPHB5Q86YW7 130 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 GATAD1Q8WUU5 269 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 TMEM158Q8WZ71 300 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 RNF2Q99496 336 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 CITED1Q99966 193 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 MRPL32Q9BYC8 188 aaKnown RBP12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 PLA2G2EQ9NZK7 142 aa12.84□□□□□ -0.35
CDK5RAP3-230ENST00000584042 SEC14L6B5MCN3 397 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 HYPMO75409 117 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 OR5G3P0C626 314 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 HOXD3P31249 432 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 USF2Q15853 346 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 DEFB136Q30KP8 78 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 GCSAMLQ5JQS6 135 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 REC114Q7Z4M0 266 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 LURAP1LQ8IV03 231 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 OR1B1Q8NGR6 318 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 LRRC20Q8TCA0 184 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 RNF141Q8WVD5 230 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 RCC1LQ96I51 464 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 PBDC1Q9BVG4 233 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 VSIRQ9H7M9 311 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 RPRMQ9NS64 109 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 HIGD1AQ9Y241 93 aa12.83□□□□□ -0.36
CDK5RAP3-230ENST00000584042 IGHV3-35A0A0C4DH35 117 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 A0A1W2PRX2 142 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 A8MWP6 167 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 ORM2P19652 201 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 S100A7P31151 101 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 CDC34P49427 236 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 FAM106AQ4KMX7 169 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 C10orf113Q5VZT2 155 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 S100A7AQ86SG5 101 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 OR11H1Q8NG94 326 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 OR10G4Q8NGN3 311 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 OR10G9Q8NGN4 311 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 OR10G7Q8NGN6 311 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 OR1N2Q8NGR9 330 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 TMEM37Q8WXS4 190 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 DPF1Q92782 380 aa12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 MRPL27Q9P0M9 148 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-230ENST00000584042 DOK5Q9P104 306 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms