RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CXCL3P19876 107 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
SKA2-209ENST00000583976 OR10J1P30954 320 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 CAV2P51636 162 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 CYCSP99999 105 aaKnown RBP11.67□□□□□ -0.54
SKA2-209ENST00000583976 EWSR1Q01844 656 aaKnown RBP eCLIP11.67□□□□□ -0.54
SKA2-209ENST00000583976 FCN2Q15485 313 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 TMEM116Q8NCL8 245 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 IL17DQ8TAD2 202 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 LINC00476Q8WZB0 136 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 SLC35E1Q96K37 410 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 TECRQ9NZ01 308 aaKnown RBP11.67□□□□□ -0.54
SKA2-209ENST00000583976 HERC2O95714 4834 aa11.67□□□□□ -0.54
SKA2-209ENST00000583976 TRAV30A0A087WSZ9 112 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 FAM24AA6NFZ4 105 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 PMS2P5A8MQ11 134 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 SCGB2A1O75556 95 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 IGLC1P0CG04 106 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 RRAS2P62070 204 aaPredicted RBP11.66□□□□□ -0.54
SKA2-209ENST00000583976 TMEM14EPQ6UXP3 125 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 TMEM190Q8WZ59 177 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 ZNF414Q96IQ9 312 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 GGTLC1Q9BX51 225 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 C11orf1Q9H5F2 150 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 UFC1Q9Y3C8 167 aa11.66□□□□□ -0.54
SKA2-209ENST00000583976 PUS1Q9Y606 427 aaKnown RBP eCLIP11.66□□□□□ -0.54
SKA2-209ENST00000583976 SMCO3A2RU48 225 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 DEDDO75618 318 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 IGKV1-17P01599 117 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 RLN2P04090 185 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 TOMM20LQ6UXN7 152 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 ZNF600Q6ZNG1 722 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 ACOT7LQ6ZUV0 252 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 OR11H7Q8NGC8 314 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 OR10P1Q8NGE3 313 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 PPP1R1CQ8WVI7 109 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 OR5AC2Q9NZP5 309 aa11.65□□□□□ -0.54
SKA2-209ENST00000583976 ZFP92A6NM28 416 aa11.64□□□□□ -0.55
SKA2-209ENST00000583976 H0YIZ8 118 aa11.64□□□□□ -0.55
SKA2-209ENST00000583976 CST7O76096 145 aa11.64□□□□□ -0.55
SKA2-209ENST00000583976 ARL16Q0P5N6 197 aa11.64□□□□□ -0.55
SKA2-209ENST00000583976 OR1S2Q8NGQ3 325 aa11.64□□□□□ -0.55
SKA2-209ENST00000583976 IGHV3-49A0A0A0MS15 119 aa11.63□□□□□ -0.55
SKA2-209ENST00000583976 A0A0J9YWU9 116 aa11.63□□□□□ -0.55
SKA2-209ENST00000583976 CXorf65A6NEN9 183 aa11.63□□□□□ -0.55
SKA2-209ENST00000583976 AKR1C1Q04828 323 aa11.63□□□□□ -0.55
SKA2-209ENST00000583976 TMEM217Q8N7C4 229 aa11.63□□□□□ -0.55
SKA2-209ENST00000583976 Q8WTZ3 238 aa11.63□□□□□ -0.55
SKA2-209ENST00000583976 DAZ1Q9NQZ3 744 aaKnown RBP11.63□□□□□ -0.55
SKA2-209ENST00000583976 LYRM2Q9NU23 88 aaPredicted RBP11.63□□□□□ -0.55
SKA2-209ENST00000583976 UBQLN2Q9UHD9 624 aa11.63□□□□□ -0.55
SKA2-209ENST00000583976 IGKV1D-37A0A075B6S9 117 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 IGHV3OR16-13A0A075B7E8 117 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 LOC102724200A0A096LPH7 203 aaPredicted RBP11.62□□□□□ -0.55
SKA2-209ENST00000583976 IGHV3-74A0A0B4J1X5 117 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 IGSF23A1L1A6 192 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 E5RGE8 158 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 MPC2O95563 127 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 RD3LP0DJH9 198 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 ELLP55199 621 aaPredicted RBP11.62□□□□□ -0.55
SKA2-209ENST00000583976 YPEL3P61236 119 aaPredicted RBP11.62□□□□□ -0.55
SKA2-209ENST00000583976 ZNF90Q03938 601 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 TMEM252Q8N6L7 170 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 RNF126Q9BV68 326 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 ZFAND3Q9H8U3 227 aa11.62□□□□□ -0.55
SKA2-209ENST00000583976 MRPL27Q9P0M9 148 aaKnown RBP11.62□□□□□ -0.55
SKA2-209ENST00000583976 VPS13DQ5THJ4 4388 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 IGKV1OR2-108A0A075B7D4 117 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 TRAV14DV4A0A0A6YYC5 116 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 K7EMT4 169 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 LY6G6CO95867 125 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 PSG1P11464 419 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 DLK1P80370 383 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 SLC38A11Q08AI6 406 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 OR2F1Q13607 317 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 DEFB135Q30KP9 77 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 GINS3Q9BRX5 216 aa11.61□□□□□ -0.55
SKA2-209ENST00000583976 IGHV3-66A0A0C4DH42 116 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 TOMM40O96008 361 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 IL4P05112 153 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 C8orf88P0DMB2 117 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 P2RY1P47900 373 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 SULT1A1P50225 295 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 STX12Q86Y82 276 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 THAP8Q8NA92 274 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 MARC2Q969Z3 335 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 SMPXQ9UHP9 88 aa11.6□□□□□ -0.55
SKA2-209ENST00000583976 IGHV7-4-1A0A0J9YVY3 117 aa11.59□□□□□ -0.55
SKA2-209ENST00000583976 APOHP02749 345 aaPredicted RBP11.59□□□□□ -0.55
SKA2-209ENST00000583976 PET100P0DJ07 73 aa11.59□□□□□ -0.55
SKA2-209ENST00000583976 GATA2P23769 480 aaPredicted RBP11.59□□□□□ -0.55
SKA2-209ENST00000583976 NHLH2Q02577 135 aa11.59□□□□□ -0.55
SKA2-209ENST00000583976 ODF3L2Q3SX64 289 aa11.59□□□□□ -0.55
SKA2-209ENST00000583976 TMEM144Q7Z5S9 345 aa11.59□□□□□ -0.55
SKA2-209ENST00000583976 LILRB2Q8N423 598 aa11.59□□□□□ -0.55
SKA2-209ENST00000583976 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
SKA2-209ENST00000583976 TRGV9Q99603 122 aa11.59□□□□□ -0.55
SKA2-209ENST00000583976 PBDC1Q9BVG4 233 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms