RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 SMUG1Q53HV7 270 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 Q56UQ5 140 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 DMRTA1Q5VZB9 504 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 PVRIGQ6DKI7 326 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 VN1R17PQ8TDU5 208 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 C4orf3Q8WVX3 66 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 SCRT1Q9BWW7 348 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 SMDT1Q9H4I9 107 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 C21orf62Q9NYP8 219 aa8.47□□□□□ -1.05
TOP3A-216ENST00000583804 TRBV7-1A0A0A6YYK4 115 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 IGHV3-35A0A0C4DH35 117 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 ADARB2-AS1A8MUL3 147 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 LGALS1P09382 135 aaKnown RBP8.46□□□□□ -1.05
TOP3A-216ENST00000583804 SFTA3P0C7M3 94 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 GATA2P23769 480 aaPredicted RBP8.46□□□□□ -1.05
TOP3A-216ENST00000583804 ATP6V0CP27449 155 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 CAMLGP49069 296 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 MFAP4P55083 255 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 PEA15Q15121 130 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 ETFRF1Q6IPR1 90 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 ZNF343Q6P1L6 599 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 TREML4Q6UXN2 200 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 CLEC19AQ6UXS0 136 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 TMEM182Q6ZP80 229 aaPredicted RBP8.46□□□□□ -1.05
TOP3A-216ENST00000583804 DPF1Q92782 380 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 GNPNAT1Q96EK6 184 aaPredicted RBP8.46□□□□□ -1.05
TOP3A-216ENST00000583804 DUX3Q96PT4 197 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 MGST2Q99735 147 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 WDR61Q9GZS3 305 aaKnown RBP8.46□□□□□ -1.05
TOP3A-216ENST00000583804 TMEM231Q9H6L2 316 aa8.46□□□□□ -1.05
TOP3A-216ENST00000583804 PEF1Q9UBV8 284 aaKnown RBP8.46□□□□□ -1.05
TOP3A-216ENST00000583804 OR2T8A6NH00 312 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 ZFP92A6NM28 416 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 NUPL2O15504 423 aaKnown RBP8.45□□□□□ -1.06
TOP3A-216ENST00000583804 TRBV12-3P01733 135 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 CLEC3BP05452 202 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 OR10J1P30954 320 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 GPR183P32249 361 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 GPX4P36969 197 aaPredicted RBP8.45□□□□□ -1.06
TOP3A-216ENST00000583804 FLI1Q01543 452 aaPredicted RBP8.45□□□□□ -1.06
TOP3A-216ENST00000583804 ATP6V1FQ16864 119 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 TIGITQ495A1 244 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 DPPA3Q6W0C5 159 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 OR11H1Q8NG94 326 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 OR1N2Q8NGR9 330 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 ZNF502Q8TBZ5 544 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 DOK5Q9P104 306 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 WDR83OSQ9Y284 106 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 STAB1Q9NY15 2570 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 IGKV1OR2-108A0A075B7D4 117 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.45□□□□□ -1.06
TOP3A-216ENST00000583804 PPP5D1E7EU14 171 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 CCL24O00175 119 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 GNG7O60262 68 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 HSPB1P04792 205 aaKnown RBP8.45□□□□□ -1.06
TOP3A-216ENST00000583804 NPBWR1P48145 328 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 ZNF90Q03938 601 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 GUK1Q16774 197 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 VWC2Q2TAL6 325 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 MIC13Q5XKP0 118 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 CCDC140Q96MF4 163 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 PBDC1Q9BVG4 233 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 NPCDR1Q9BY65 106 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 NPVFQ9HCQ7 196 aa8.45□□□□□ -1.06
TOP3A-216ENST00000583804 IGKV1D-37A0A075B6S9 117 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 IGHV4OR15-8A0A075B7B6 117 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 IGHV3OR16-8A0A075B7F1 116 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 A0A087WW49 117 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 M0QZ24 198 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 AGPAT2O15120 278 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 SCAF4O95104 1147 aaKnown RBP8.44□□□□□ -1.06
TOP3A-216ENST00000583804 ARL3P36405 182 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 ZNF616Q08AN1 781 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 FAM209BQ5JX69 171 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 TEPPQ6URK8 271 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 ZNF709Q8N972 641 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 OR4F17Q8NGA8 305 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 OR2G3Q8NGZ4 309 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 OR4X1Q8NH49 305 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 CACNG8Q8WXS5 425 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 RAX2Q96IS3 184 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 OR4F4Q96R69 305 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 TXN2Q99757 166 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 GGACTQ9BVM4 153 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 GGTLC1Q9BX51 225 aa8.44□□□□□ -1.06
TOP3A-216ENST00000583804 GAR1Q9NY12 217 aaKnown RBP8.44□□□□□ -1.06
TOP3A-216ENST00000583804 A0A1B0GV50 99 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 C9JQL5 133 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 F8W735 103 aaPredicted RBP8.43□□□□□ -1.06
TOP3A-216ENST00000583804 LINC01619G3V211 115 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 TGOLN2O43493 480 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 GGCTO75223 188 aaKnown RBP8.43□□□□□ -1.06
TOP3A-216ENST00000583804 OR2C1O95371 312 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 PF4P02776 101 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 GCSAMLQ5JQS6 135 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 FFAR4Q5NUL3 377 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 CYP2G1PQ6ZSU1 146 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 TMEM144Q7Z5S9 345 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 SPATA3Q8NHX4 192 aa8.43□□□□□ -1.06
TOP3A-216ENST00000583804 PARD6GQ9BYG4 376 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms