RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	GDF5OS	Q5U4N7	250 aa		10.87	□□□□□ -0.67
SREBF1-222	ENST00000583732	LINC00336	Q6ZUF6	198 aa		10.87	□□□□□ -0.67
SREBF1-222	ENST00000583732	NDUFAF3	Q9BU61	184 aa		10.87	□□□□□ -0.67
SREBF1-222	ENST00000583732	PCLO	Q9Y6V0	5065 aa		10.87	□□□□□ -0.67
SREBF1-222	ENST00000583732	SMIM18	P0DKX4	95 aa		10.86	□□□□□ -0.67
SREBF1-222	ENST00000583732	HLA-DRB4	P13762	266 aa		10.86	□□□□□ -0.67
SREBF1-222	ENST00000583732	NMS	Q5H8A3	153 aa		10.86	□□□□□ -0.67
SREBF1-222	ENST00000583732	POM121L12	Q8N7R1	296 aa		10.86	□□□□□ -0.67
SREBF1-222	ENST00000583732	RNF125	Q96EQ8	232 aa		10.86	□□□□□ -0.67
SREBF1-222	ENST00000583732	LINC00052	Q96N35	136 aa		10.86	□□□□□ -0.67
SREBF1-222	ENST00000583732	GPR132	Q9UNW8	380 aa		10.86	□□□□□ -0.67
SREBF1-222	ENST00000583732	HLA-DRB4	X5D2U9	266 aa		10.86	□□□□□ -0.67
SREBF1-222	ENST00000583732	CTDSP2	O14595	271 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	AKAIN1	P0CW23	69 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732		P0DMU3	169 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	FAM231A	P0DMU4	169 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	FAM231C	P0DMU5	169 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	SSBP1	Q04837	148 aa	Known RBP	10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	SURF2	Q15527	256 aa	Predicted RBP	10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	NOXA1	Q86UR1	476 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	OR51S1	Q8NGJ8	323 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	DTD1	Q8TEA8	209 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	SMIM4	Q8WVI0	70 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	RBKS	Q9H477	322 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	TMEM56-RWDD3	S4R434	201 aa		10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732	DYNC1H1	Q14204	4646 aa	Known RBP	10.85	□□□□□ -0.67
SREBF1-222	ENST00000583732		A0A1B0GVY2	172 aa		10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	PRSS29P	A6NIE9	313 aa		10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	ZFP92	A6NM28	416 aa		10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	NKX2-1	P43699	371 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	MRPS10	P82664	201 aa	Known RBP	10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	IL18	Q14116	193 aa		10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	UBE2DNL	Q8IWF7	75 aa		10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	LGI3	Q8N145	548 aa		10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	WDR12	Q9GZL7	423 aa	Known RBP	10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	SEPSECS	Q9HD40	501 aa	Known RBP	10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	PKHD1	P08F94	4074 aa		10.84	□□□□□ -0.67
SREBF1-222	ENST00000583732	IGLV2-18	A0A075B6J9	118 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	SPART-AS1	P0CW21	52 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	HTN3	P15516	51 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	LYZ	P61626	148 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	ZNF90	Q03938	601 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	KLF9	Q13886	244 aa	Predicted RBP	10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	SPCS2	Q15005	226 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	LYZL2	Q7Z4W2	148 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	OR4B1	Q8NGF8	309 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	COQ8A	Q8NI60	647 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	SLC35E1	Q96K37	410 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	PRRT1	Q99946	306 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	SLC35B3	Q9H1N7	401 aa		10.83	□□□□□ -0.68
SREBF1-222	ENST00000583732	IGKV1D-37	A0A075B6S9	117 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	RTL8C	O15255	209 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	ZNF705D	P0CH99	300 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	ZNF705B	P0CI00	300 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	AKR1C4	P17516	323 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	NUP62	P37198	522 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	CCR6	P51684	374 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	OR2F1	Q13607	317 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	SMCO1	Q147U7	214 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	IL22RA2	Q969J5	263 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	PPP1R14B	Q96C90	147 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	DIRAS2	Q96HU8	199 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	SAV1	Q9H4B6	383 aa	Predicted RBP	10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	PLA2G2E	Q9NZK7	142 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	HSPB7	Q9UBY9	170 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	KCNIP3	Q9Y2W7	256 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	RFNG	Q9Y644	331 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732		U3KQ87	197 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732	PKD1	P98161	4303 aa		10.82	□□□□□ -0.68
SREBF1-222	ENST00000583732		F6UB75	175 aa		10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	ID1	P41134	155 aa		10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	FAM222A	Q5U5X8	452 aa		10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	OR8G2P	Q6IF36	304 aa		10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	FOXI2	Q6ZQN5	318 aa		10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	OR1S1	Q8NH92	325 aa		10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	NEU1	Q99519	415 aa		10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	MCUB	Q9NWR8	336 aa		10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	PAIP2B	Q9ULR5	123 aa	Known RBP	10.81	□□□□□ -0.68
SREBF1-222	ENST00000583732	DNAH11	Q96DT5	4516 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732		A0A0B4J2A0	478 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	TMEM189	A5PLL7	270 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	IAPP	P10997	89 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	PSMB3	P49720	205 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	SUPT4H1	P63272	117 aa	Known RBP	10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	GAMT	Q14353	236 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	GPR141	Q7Z602	305 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	ZNF709	Q8N972	641 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	C7orf50	Q9BRJ6	194 aa	Known RBP	10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	DKK2	Q9UBU2	259 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	CACFD1	Q9UGQ2	172 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	SHPK	Q9UHJ6	478 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	PFDN2	Q9UHV9	154 aa		10.8	□□□□□ -0.68
SREBF1-222	ENST00000583732	ANKRD20A5P	A0PJZ0	165 aa		10.79	□□□□□ -0.68
SREBF1-222	ENST00000583732	SMIM9	A6NGZ8	99 aa		10.79	□□□□□ -0.68
SREBF1-222	ENST00000583732	SOCS3	O14543	225 aa		10.79	□□□□□ -0.68
SREBF1-222	ENST00000583732	CTDSPL	O15194	276 aa		10.79	□□□□□ -0.68
SREBF1-222	ENST00000583732	IFNA21	P01568	189 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms