RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 YIF1AO95070 293 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 IGHV3-48P01763 117 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 PSG1P11464 419 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 CBLN1P23435 193 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 CRYBB3P26998 211 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 RPL29P47914 159 aaKnown RBP7.11□□□□□ -1.27
UBBP4-201ENST00000583708 EIF2B2P49770 351 aaKnown RBP7.11□□□□□ -1.27
UBBP4-201ENST00000583708 DEFA5Q01523 94 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 NHLH2Q02577 135 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 ARL16Q0P5N6 197 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 ZNF345Q14585 488 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 TIGITQ495A1 244 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 C1orf194Q5T5A4 169 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 LAMTOR1Q6IAA8 161 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 CYP2G1PQ6ZSU1 146 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 AKAP14Q86UN6 197 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 HAPLN4Q86UW8 402 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 TMEM217Q8N7C4 229 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 ZNF709Q8N972 641 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 SCGB1C1Q8TD33 95 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 GRAMD2BQ96HH9 432 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 ST6GAL2Q96JF0 529 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 HYLS1Q96M11 299 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 ATP5SQ99766 215 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 MRPL36Q9P0J6 103 aaKnown RBP7.11□□□□□ -1.27
UBBP4-201ENST00000583708 PUS1Q9Y606 427 aaKnown RBP eCLIP7.11□□□□□ -1.27
UBBP4-201ENST00000583708 S4R3C0 116 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 MGAM2Q2M2H8 2515 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 NOTCH3Q9UM47 2321 aa7.11□□□□□ -1.27
UBBP4-201ENST00000583708 PKD1L1Q8TDX9 2849 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 IGKV1OR2-108A0A075B7D4 117 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 FXYD6-FXYD2A0A087WZ82 144 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 BORCS7-ASMTA0A0B4J1R7 106 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 C2orf70A6NJV1 201 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 JTBO76095 146 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 C1QBP02746 253 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 CSN3P07498 182 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 FOLR2P14207 255 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 C4BPBP20851 252 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 CAMLGP49069 296 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 CMC4P56277 68 aaPredicted RBP7.1□□□□□ -1.27
UBBP4-201ENST00000583708 EIF5AP63241 154 aaKnown RBP7.1□□□□□ -1.27
UBBP4-201ENST00000583708 BTNL8Q6UX41 500 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 IL34Q6ZMJ4 242 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 Q6ZRG5 221 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 DUX3Q96PT4 197 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 FBXL17Q9UF56 701 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 SMPXQ9UHP9 88 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 RABAC1Q9UI14 185 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 U3KQE9 123 aa7.1□□□□□ -1.27
UBBP4-201ENST00000583708 IGHV7-4-1A0A0J9YVY3 117 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 TMEM213A2RRL7 107 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 G3V3Q6 166 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 AGPAT2O15120 278 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 HYPMO75409 117 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 IGLV1-51P01701 117 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 HNRNPCP07910 306 aaKnown RBP eCLIP7.09□□□□□ -1.27
UBBP4-201ENST00000583708 Q5BKY6 102 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 SAMD13Q5VXD3 122 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 OR1L4Q8NGR5 311 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 GNPNAT1Q96EK6 184 aaPredicted RBP7.09□□□□□ -1.27
UBBP4-201ENST00000583708 RNF125Q96EQ8 232 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 GPR82Q96P67 336 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 PFDN5Q99471 154 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 RNF2Q99496 336 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 C20orf24Q9BUV8 137 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 WDR61Q9GZS3 305 aaKnown RBP7.09□□□□□ -1.27
UBBP4-201ENST00000583708 MFFQ9GZY8 342 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 VSIRQ9H7M9 311 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 TIMM9Q9Y5J7 89 aa7.09□□□□□ -1.27
UBBP4-201ENST00000583708 TRAV2A0A0B4J234 112 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 HELTA6NFD8 242 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 SAP30O75446 220 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 IL4P05112 153 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 FGF7P21781 194 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 MEOX2P50222 304 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 PAFAH1B2P68402 229 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 SERF2P84101 59 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 PRR20EP86478 221 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 PRR20CP86479 221 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 PRR20DP86480 221 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 PRR20BP86481 221 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 PRR20AP86496 221 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 ZNF90Q03938 601 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 OPCMLQ14982 345 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 DEFB114Q30KQ6 69 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 TM4SF20Q53R12 229 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 KPRPQ5T749 579 aaPredicted RBP7.08□□□□□ -1.28
UBBP4-201ENST00000583708 LCN12Q6JVE5 192 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 UNQ9165/PRO28630Q6UXU0 137 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 KCNRGQ8N5I3 272 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 DYNLRB2Q8TF09 96 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 GATAD1Q8WUU5 269 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 SEPSECSQ9HD40 501 aaKnown RBP7.08□□□□□ -1.28
UBBP4-201ENST00000583708 DNAJC4Q9NNZ3 241 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 DNHD1Q96M86 4753 aa7.08□□□□□ -1.28
UBBP4-201ENST00000583708 UBE2L5PA0A1B0GUS4 154 aa7.07□□□□□ -1.28
UBBP4-201ENST00000583708 RNF222A6NCQ9 220 aa7.07□□□□□ -1.28
UBBP4-201ENST00000583708 CHEK1O14757 476 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms