RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CITED1Q99966 193 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 RSG1Q9BU20 258 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 TIMM9Q9Y5J7 89 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 RFNGQ9Y644 331 aa12.57□□□□□ -0.4
CDK5RAP3-228ENST00000583363 IGHV4OR15-8A0A075B7B6 117 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 A0A087WW49 117 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 NUDT19A8MXV4 375 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 C17orf112F2Z3M2 114 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 OR2C1O95371 312 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 FABP1P07148 127 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PSG1P11464 419 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PRR20EP86478 221 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PRR20CP86479 221 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PRR20DP86480 221 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PRR20BP86481 221 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PRR20AP86496 221 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 ZNF616Q08AN1 781 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 MIC13Q5XKP0 118 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 ZNF600Q6ZNG1 722 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 C8orf86Q6ZUL3 223 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 BPIFCQ8NFQ6 507 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 OR1N2Q8NGR9 330 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 Q8WTZ3 238 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 ST8SIA2Q92186 375 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 GNPNAT1Q96EK6 184 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PSMG3Q9BT73 122 aaPredicted RBP12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 CMYA5Q8N3K9 4069 aa12.56□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SPP1P10451 314 aa12.55□□□□□ -0.4
CDK5RAP3-228ENST00000583363 RELQ04864 619 aaPredicted RBP12.55□□□□□ -0.4
CDK5RAP3-228ENST00000583363 GPHB5Q86YW7 130 aa12.55□□□□□ -0.4
CDK5RAP3-228ENST00000583363 OR11H1Q8NG94 326 aa12.55□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SH3BGRL3Q9H299 93 aa12.55□□□□□ -0.4
CDK5RAP3-228ENST00000583363 IGHV3-35A0A0C4DH35 117 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 LINC01619G3V211 115 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 CFDP00746 253 aaPredicted RBP12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 DEFA6Q01524 100 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 DEFB136Q30KP8 78 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 NSUN5P1Q3KNT7 163 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 TOMM20LQ6UXN7 152 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 STPG3Q8N7X2 389 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 OR51G1Q8NGK1 321 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 DPF1Q92782 380 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 RAX2Q96IS3 184 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SLC25A32Q9H2D1 315 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SLC39A9Q9NUM3 307 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PUS1Q9Y606 427 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PXMP4Q9Y6I8 212 aa12.54□□□□□ -0.4
CDK5RAP3-228ENST00000583363 WI2-2373I1.2A0A1W2PRP0 233 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 NDUFA4O00483 81 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 TSPAN15O95858 294 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SEC11BP0C7V7 166 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 ZP3P21754 424 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PLP1P60201 277 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 B2MP61769 119 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 SERF2P84101 59 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 OR2G3Q8NGZ4 309 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 KCNIP2Q9NS61 270 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
CDK5RAP3-228ENST00000583363 CCL24O00175 119 aa12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 YIF1AO95070 293 aa12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 KLF5Q13887 457 aaPredicted RBP12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 RPEL1Q2QD12 228 aa12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 FAM106AQ4KMX7 169 aa12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 FFAR4Q5NUL3 377 aa12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 Q6ZRG5 221 aa12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 DUX3Q96PT4 197 aa12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ZFAND3Q9H8U3 227 aa12.52□□□□□ -0.41
CDK5RAP3-228ENST00000583363 HOXD3P31249 432 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 MYCNOSP40205 109 aa12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 FHL3Q13643 280 aa12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 PXDC1Q5TGL8 231 aa12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 UNQ9165/PRO28630Q6UXU0 137 aa12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 PATE2Q6UY27 113 aa12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 RCC1LQ96I51 464 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 DNAJC4Q9NNZ3 241 aa12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 MRPL27Q9P0M9 148 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 PRKDCP78527 4128 aaKnown RBP12.51□□□□□ -0.41
CDK5RAP3-228ENST00000583363 HYPMO75409 117 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 IL4P05112 153 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ORM2P19652 201 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 SLURP1P55000 103 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 LYZP61626 148 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 TMED6Q8WW62 240 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 TMEM37Q8WXS4 190 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 RNF125Q96EQ8 232 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 PHYHIPLQ96FC7 376 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 VSIRQ9H7M9 311 aa12.5□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ZNF320A2RRD8 509 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 LGALS9O00182 355 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 MBP02144 154 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ELLP55199 621 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 USF2Q15853 346 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 GCSAMLQ5JQS6 135 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 TEX261Q6UWH6 196 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 REC114Q7Z4M0 266 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 OR1L4Q8NGR5 311 aa12.49□□□□□ -0.41
CDK5RAP3-228ENST00000583363 OR1B1Q8NGR6 318 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms