RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 RAB31Q13636 194 aa10.46□□□□□ -0.73
ITGB4-209ENST00000583327 DEFB136Q30KP8 78 aa10.46□□□□□ -0.73
ITGB4-209ENST00000583327 C12orf54Q6X4T0 127 aa10.46□□□□□ -0.73
ITGB4-209ENST00000583327 PSMG3Q9BT73 122 aaPredicted RBP10.46□□□□□ -0.73
ITGB4-209ENST00000583327 ZFAND3Q9H8U3 227 aa10.46□□□□□ -0.73
ITGB4-209ENST00000583327 RFNGQ9Y644 331 aa10.46□□□□□ -0.73
ITGB4-209ENST00000583327 SCGB2A1O75556 95 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 FABP1P07148 127 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 SPP1P10451 314 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 ZP3P21754 424 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 GATA2P23769 480 aaPredicted RBP10.45□□□□□ -0.74
ITGB4-209ENST00000583327 KHDC1LQ5JSQ8 128 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 SHISA2Q6UWI4 295 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 TOMM20LQ6UXN7 152 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 REC114Q7Z4M0 266 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 BAP18Q8IXM2 172 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 OR51G1Q8NGK1 321 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 OR2G3Q8NGZ4 309 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 Q8WTZ3 238 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 GNPNAT1Q96EK6 184 aaPredicted RBP10.45□□□□□ -0.74
ITGB4-209ENST00000583327 RSG1Q9BU20 258 aa10.45□□□□□ -0.74
ITGB4-209ENST00000583327 ZNF471Q9BX82 626 aaPredicted RBP10.45□□□□□ -0.74
ITGB4-209ENST00000583327 A0A1W2PRX2 142 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 NUDT19A8MXV4 375 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 K7EMT4 169 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 YIF1AO95070 293 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
ITGB4-209ENST00000583327 EIF5AP63241 154 aaKnown RBP10.44□□□□□ -0.74
ITGB4-209ENST00000583327 SERF2P84101 59 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 NSUN5P1Q3KNT7 163 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 PXDC1Q5TGL8 231 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 MIC13Q5XKP0 118 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 UNQ9165/PRO28630Q6UXU0 137 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 PATE2Q6UY27 113 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 C3orf56Q8N813 242 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 BPIFCQ8NFQ6 507 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 PLA2G2EQ9NZK7 142 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 MRPL27Q9P0M9 148 aaKnown RBP10.44□□□□□ -0.74
ITGB4-209ENST00000583327 PUS1Q9Y606 427 aaKnown RBP eCLIP10.44□□□□□ -0.74
ITGB4-209ENST00000583327 PXMP4Q9Y6I8 212 aa10.44□□□□□ -0.74
ITGB4-209ENST00000583327 TENM1Q9UKZ4 2725 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 IGHV3-35A0A0C4DH35 117 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 C17orf112F2Z3M2 114 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 SEC11BP0C7V7 166 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 TPT1P13693 172 aaKnown RBP10.43□□□□□ -0.74
ITGB4-209ENST00000583327 ELLP55199 621 aaPredicted RBP10.43□□□□□ -0.74
ITGB4-209ENST00000583327 FAM106AQ4KMX7 169 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 STPG3Q8N7X2 389 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 HSD17B11Q8NBQ5 300 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 TMEM37Q8WXS4 190 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 TMEM190Q8WZ59 177 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 ST8SIA2Q92186 375 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 DPF1Q92782 380 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 RCC1LQ96I51 464 aaKnown RBP10.43□□□□□ -0.74
ITGB4-209ENST00000583327 DUX3Q96PT4 197 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 SH3BGRL3Q9H299 93 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 SLC39A9Q9NUM3 307 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 U3KQE9 123 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 ATRQ13535 2644 aa10.43□□□□□ -0.74
ITGB4-209ENST00000583327 A8MWP6 167 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 TSPAN15O95858 294 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 SLURP1P55000 103 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 B2MP61769 119 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 USF2Q15853 346 aaPredicted RBP10.42□□□□□ -0.74
ITGB4-209ENST00000583327 RPEL1Q2QD12 228 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 IL34Q6ZMJ4 242 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 C1QL4Q86Z23 238 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 ZNF709Q8N972 641 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 DLX4Q92988 240 aaPredicted RBP10.42□□□□□ -0.74
ITGB4-209ENST00000583327 RNF125Q96EQ8 232 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 SLC25A32Q9H2D1 315 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 KCNIP2Q9NS61 270 aa10.42□□□□□ -0.74
ITGB4-209ENST00000583327 IL4P05112 153 aa10.41□□□□□ -0.74
ITGB4-209ENST00000583327 C8orf88P0DMB2 117 aa10.41□□□□□ -0.74
ITGB4-209ENST00000583327 CRYBB3P26998 211 aa10.41□□□□□ -0.74
ITGB4-209ENST00000583327 OR4F17Q8NGA8 305 aa10.41□□□□□ -0.74
ITGB4-209ENST00000583327 PHYHIPLQ96FC7 376 aa10.41□□□□□ -0.74
ITGB4-209ENST00000583327 OR4F4Q96R69 305 aa10.41□□□□□ -0.74
ITGB4-209ENST00000583327 DNAJC4Q9NNZ3 241 aa10.41□□□□□ -0.74
ITGB4-209ENST00000583327 ELOA3CA0A087WX78 387 aaPredicted RBP10.4□□□□□ -0.74
ITGB4-209ENST00000583327 HYPMO75409 117 aa10.4□□□□□ -0.74
ITGB4-209ENST00000583327 SYNJ2BPP57105 145 aa10.4□□□□□ -0.74
ITGB4-209ENST00000583327 Q6ZRG5 221 aa10.4□□□□□ -0.74
ITGB4-209ENST00000583327 LINC00482Q8N8I6 264 aa10.4□□□□□ -0.74
ITGB4-209ENST00000583327 WFDC9Q8NEX5 89 aa10.4□□□□□ -0.74
ITGB4-209ENST00000583327 GATAD1Q8WUU5 269 aa10.4□□□□□ -0.74
ITGB4-209ENST00000583327 TMEM213A2RRL7 107 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 M6PRP20645 277 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 TM4SF20Q53R12 229 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 GCSAMLQ5JQS6 135 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 FFAR4Q5NUL3 377 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 ADAMTSL5Q6ZMM2 481 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 RPP25LQ8N5L8 163 aaKnown RBP10.39□□□□□ -0.75
ITGB4-209ENST00000583327 OR1L4Q8NGR5 311 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 VSIRQ9H7M9 311 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 RPRMQ9NS64 109 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 SIGLEC8Q9NYZ4 499 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 UFC1Q9Y3C8 167 aa10.39□□□□□ -0.75
ITGB4-209ENST00000583327 ZNF320A2RRD8 509 aa10.38□□□□□ -0.75
ITGB4-209ENST00000583327 UMAD1C9J7I0 102 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms