RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 WFDC3Q8IUB2 231 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 OR51G1Q8NGK1 321 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 GRAMD2BQ96HH9 432 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 TM2D3Q9BRN9 247 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 PBDC1Q9BVG4 233 aa9.4□□□□□ -0.9
SMARCE1-218ENST00000582955 IGKV1D-37A0A075B6S9 117 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 MBPP02686 304 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 IL5P05113 134 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 ZNF90Q03938 601 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 AKR1C1Q04828 323 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 ODF3L2Q3SX64 289 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 OR8G2PQ6IF36 304 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 LINC00322Q6ZN03 302 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 ACOT7LQ6ZUV0 252 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 NRARPQ7Z6K4 114 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 RNF125Q96EQ8 232 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 SMIM8Q96KF7 97 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 WWC2-AS2Q96NR7 200 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 RAB40CQ96S21 281 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 GPN1Q9HCN4 374 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 RABAC1Q9UI14 185 aa9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 LSM5Q9Y4Y9 91 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 HUWE1Q7Z6Z7 4374 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-218ENST00000582955 LOC102724200A0A096LPH7 203 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 SMCO3A2RU48 225 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 PRSS46E5RG02 174 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 L7N2F9 121 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 METTL15P1P0C7V9 234 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 EIF2B2P49770 351 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 PAX9P55771 341 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 LYZP61626 148 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 VAMP2P63027 116 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 OR2F1Q13607 317 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 GSG1LQ6UXU4 331 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 THAP8Q8NA92 274 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 STXBP6Q8NFX7 210 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 C2orf50Q96LR7 162 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 CITED4Q96RK1 184 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 TRGV9Q99603 122 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 GGTLC1Q9BX51 225 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 MS4A6AQ9H2W1 248 aa9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 RCL1Q9Y2P8 373 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-218ENST00000582955 INMT-MINDY4F8WBC2 141 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 TSC22D2O75157 780 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 CCNKO75909 580 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 CMC4P56277 68 aaPredicted RBP9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 TAS2R30P59541 319 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 PRR20EP86478 221 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 PRR20CP86479 221 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 PRR20DP86480 221 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 PRR20BP86481 221 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 PRR20AP86496 221 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 C16orf54Q6UWD8 224 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 APRG1Q8IVJ8 170 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 FAM110AQ9BQ89 295 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 RETNQ9HD89 108 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 U3KQE9 123 aa9.37□□□□□ -0.91
SMARCE1-218ENST00000582955 IGKV1OR2-108A0A075B7D4 117 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 C7orf66A4D0T2 115 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 HELTA6NFD8 242 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 SNRPGP15A8MWD9 76 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 K7EPK0 472 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 PRAF2O60831 178 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 BCAP31P51572 246 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 S100A10P60903 97 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 RRAS2P62070 204 aaPredicted RBP9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 TMEM14EPQ6UXP3 125 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 OR10P1Q8NGE3 313 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 PPP1R14BQ96C90 147 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 MAP6D1Q9H9H5 199 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 PFDN2Q9UHV9 154 aa9.36□□□□□ -0.91
SMARCE1-218ENST00000582955 TRAV2A0A0B4J234 112 aa9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 PMS2P5A8MQ11 134 aa9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 BUB3O43684 328 aa9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 RPL35AP18077 110 aaKnown RBP9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 PVALBP20472 110 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 NUP62P37198 522 aaPredicted RBP9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 DLK1P80370 383 aa9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 ZNF124Q15973 351 aa9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 FAM24BQ8N5W8 94 aa9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 MGAT4CQ9UBM8 478 aa9.35□□□□□ -0.91
SMARCE1-218ENST00000582955 GOSR2O14653 212 aa9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 CFDP00746 253 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 GATA2P23769 480 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 CAV2P51636 162 aa9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 AP2S1P53680 142 aaPredicted RBP9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 APOC4P55056 127 aa9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 DEFB131AP59861 70 aa9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 SIGLEC15Q6ZMC9 328 aa9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 TMEM144Q7Z5S9 345 aa9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 BPIFCQ8NFQ6 507 aa9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 MARVELD1Q9BSK0 173 aa9.34□□□□□ -0.91
SMARCE1-218ENST00000582955 K7EQG2 157 aa9.33□□□□□ -0.92
SMARCE1-218ENST00000582955 SIX6O95475 246 aa9.33□□□□□ -0.92
SMARCE1-218ENST00000582955 ZNF688P0C7X2 276 aa9.33□□□□□ -0.92
SMARCE1-218ENST00000582955 ORM2P19652 201 aa9.33□□□□□ -0.92
SMARCE1-218ENST00000582955 RAB32Q13637 225 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms