RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 ELLP55199 621 aaPredicted RBP8.02□□□□□ -1.13
SS18-221ENST00000582448 BSXQ3C1V8 233 aa8.02□□□□□ -1.13
SS18-221ENST00000582448 DEFB121Q5J5C9 76 aa8.02□□□□□ -1.13
SS18-221ENST00000582448 FFAR4Q5NUL3 377 aa8.02□□□□□ -1.13
SS18-221ENST00000582448 C10orf55Q5SWW7 151 aa8.02□□□□□ -1.13
SS18-221ENST00000582448 LDLRAD2Q5SZI1 272 aa8.02□□□□□ -1.13
SS18-221ENST00000582448 SFT2D1Q8WV19 159 aa8.02□□□□□ -1.13
SS18-221ENST00000582448 SRSF12Q8WXF0 261 aaKnown RBP8.02□□□□□ -1.13
SS18-221ENST00000582448 ACTR3CQ9C0K3 210 aaPredicted RBP8.02□□□□□ -1.13
SS18-221ENST00000582448 TREM1Q9NP99 234 aa8.02□□□□□ -1.13
SS18-221ENST00000582448 PRSS46E5RG02 174 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 H3BUX3 64 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 AGPAT2O15120 278 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 PLXNB1O43157 2135 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 MT-CO2P00403 227 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 IFNA1P01562 189 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 CD24P25063 80 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 PAX6P26367 422 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 WT1-ASQ06250 92 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 FXYD3Q14802 87 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 PEA15Q15121 130 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 SLC16A13Q7RTY0 426 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 ZNF114Q8NC26 417 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 OR10G4Q8NGN3 311 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 OR10G9Q8NGN4 311 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 OR10G7Q8NGN6 311 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 OR1P1Q8NH06 330 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 OR5R1Q8NH85 324 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 OR2T6Q8NHC8 308 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 P2RX4Q99571 388 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 SSX3Q99909 188 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 EIF5A2Q9GZV4 153 aaKnown RBP8.01□□□□□ -1.13
SS18-221ENST00000582448 SLC39A9Q9NUM3 307 aa8.01□□□□□ -1.13
SS18-221ENST00000582448 TRAV1-1A0A0B4J248 108 aa8□□□□□ -1.13
SS18-221ENST00000582448 A0A1W2PPV4 95 aa8□□□□□ -1.13
SS18-221ENST00000582448 IGLC7A0M8Q6 106 aa8□□□□□ -1.13
SS18-221ENST00000582448 AMY1AP04745 511 aa8□□□□□ -1.13
SS18-221ENST00000582448 M6PRP20645 277 aa8□□□□□ -1.13
SS18-221ENST00000582448 ZP3P21754 424 aa8□□□□□ -1.13
SS18-221ENST00000582448 FHITP49789 147 aa8□□□□□ -1.13
SS18-221ENST00000582448 ZNF562Q6V9R5 426 aa8□□□□□ -1.13
SS18-221ENST00000582448 TMEM144Q7Z5S9 345 aa8□□□□□ -1.13
SS18-221ENST00000582448 DYNAPQ8N1N2 210 aa8□□□□□ -1.13
SS18-221ENST00000582448 Q8N6K4 173 aa8□□□□□ -1.13
SS18-221ENST00000582448 LYPD6BQ8NI32 183 aa8□□□□□ -1.13
SS18-221ENST00000582448 TMEM170AQ8WVE7 144 aa8□□□□□ -1.13
SS18-221ENST00000582448 C17orf50Q8WW18 174 aa8□□□□□ -1.13
SS18-221ENST00000582448 ARPC1AQ92747 370 aa8□□□□□ -1.13
SS18-221ENST00000582448 ACY3Q96HD9 319 aa8□□□□□ -1.13
SS18-221ENST00000582448 RPRMQ9NS64 109 aa8□□□□□ -1.13
SS18-221ENST00000582448 PITPNC1Q9UKF7 332 aa8□□□□□ -1.13
SS18-221ENST00000582448 CTXND1A0A1B0GTU2 59 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 A0A1B0GV50 99 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 CGB1A6NKQ9 187 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 E7EUB6 86 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 FCN1O00602 326 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 SCGB2A1O75556 95 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 REG1AP05451 166 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 FABP1P07148 127 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 CD28P10747 220 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 TAGLN2P37802 199 aaKnown RBP7.99□□□□□ -1.13
SS18-221ENST00000582448 RPL29P47914 159 aaKnown RBP7.99□□□□□ -1.13
SS18-221ENST00000582448 MRGPRG-AS1Q2M3A8 158 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 MBD3L1Q8WWY6 194 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 SMDT1Q9H4I9 107 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 THYN1Q9P016 225 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 F11RQ9Y624 299 aaKnown RBP7.99□□□□□ -1.13
SS18-221ENST00000582448 PXMP4Q9Y6I8 212 aa7.99□□□□□ -1.13
SS18-221ENST00000582448 NBEAL2Q6ZNJ1 2754 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 MAP1LC3B2A6NCE7 125 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 ZFP92A6NM28 416 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 TEX22C9J3V5 150 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 M0QZK8 103 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 HLA-DRB1P01911 266 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 AREGP15514 252 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 IGLL1P15814 213 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 CDC34P49427 236 aaPredicted RBP7.98□□□□□ -1.13
SS18-221ENST00000582448 PPT1P50897 306 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 B2MP61769 119 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 SELENOTP62341 195 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 CX3CL1P78423 397 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 GAMTQ14353 236 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 GUK1Q16774 197 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 FAM122CQ6P4D5 195 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 LCN15Q6UWW0 184 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 BPIFCQ8NFQ6 507 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 TMEM68Q96MH6 324 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 MGST2Q99735 147 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 GGTLC1Q9BX51 225 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 MAP1LC3BQ9GZQ8 125 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 MOB4Q9Y3A3 225 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 LSM4Q9Y4Z0 139 aaKnown RBP7.98□□□□□ -1.13
SS18-221ENST00000582448 RFNGQ9Y644 331 aa7.98□□□□□ -1.13
SS18-221ENST00000582448 KMT2CQ8NEZ4 4911 aaKnown RBP7.97□□□□□ -1.13
SS18-221ENST00000582448 A0A1B0GW64 132 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 TMEM218A2RU14 115 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 RBFOX3A6NFN3 312 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 NPIPB5A8MRT5 1133 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 APELAP0DMC3 54 aa7.97□□□□□ -1.13
SS18-221ENST00000582448 HIST1H1BP16401 226 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms