RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 PSG1P11464 419 aa16.31■□□□□ 0.2
CASC3-207ENST00000581849 DHRS2Q13268 280 aa16.31■□□□□ 0.2
CASC3-207ENST00000581849 OR8G2PQ6IF36 304 aa16.31■□□□□ 0.2
CASC3-207ENST00000581849 CCDC190Q86UF4 302 aa16.31■□□□□ 0.2
CASC3-207ENST00000581849 OR51G1Q8NGK1 321 aa16.31■□□□□ 0.2
CASC3-207ENST00000581849 PFDN2Q9UHV9 154 aa16.31■□□□□ 0.2
CASC3-207ENST00000581849 AGRNO00468 2067 aa16.3■□□□□ 0.2
CASC3-207ENST00000581849 ZNF701M0R085 212 aaPredicted RBP16.3■□□□□ 0.2
CASC3-207ENST00000581849 C11orf45Q8TAV5 145 aa16.3■□□□□ 0.2
CASC3-207ENST00000581849 RNF125Q96EQ8 232 aa16.3■□□□□ 0.2
CASC3-207ENST00000581849 SLC35E1Q96K37 410 aa16.3■□□□□ 0.2
CASC3-207ENST00000581849 NRN1Q9NPD7 142 aa16.3■□□□□ 0.2
CASC3-207ENST00000581849 TMED3Q9Y3Q3 217 aa16.3■□□□□ 0.2
CASC3-207ENST00000581849 CCDC160A6NGH7 325 aa16.29■□□□□ 0.2
CASC3-207ENST00000581849 FABP1P07148 127 aa16.29■□□□□ 0.2
CASC3-207ENST00000581849 GIG44P09565 113 aaPredicted RBP16.29■□□□□ 0.2
CASC3-207ENST00000581849 SIGLEC15Q6ZMC9 328 aa16.29■□□□□ 0.2
CASC3-207ENST00000581849 RBM38Q9H0Z9 239 aaKnown RBP16.29■□□□□ 0.2
CASC3-207ENST00000581849 MED6O75586 246 aa16.28■□□□□ 0.2
CASC3-207ENST00000581849 LY6G6CO95867 125 aa16.28■□□□□ 0.2
CASC3-207ENST00000581849 VAMP1P23763 118 aa16.28■□□□□ 0.2
CASC3-207ENST00000581849 SNRPD3P62318 126 aaKnown RBP16.28■□□□□ 0.2
CASC3-207ENST00000581849 RAB11AP62491 216 aa16.28■□□□□ 0.2
CASC3-207ENST00000581849 GAMTQ14353 236 aa16.28■□□□□ 0.2
CASC3-207ENST00000581849 HRH4Q9H3N8 390 aa16.28■□□□□ 0.2
CASC3-207ENST00000581849 ZFP92A6NM28 416 aa16.27■□□□□ 0.2
CASC3-207ENST00000581849 KNCNA6PVL3 124 aa16.27■□□□□ 0.2
CASC3-207ENST00000581849 SFT2D2O95562 160 aa16.27■□□□□ 0.2
CASC3-207ENST00000581849 UBE2MP61081 183 aaKnown RBP16.27■□□□□ 0.2
CASC3-207ENST00000581849 PSMG4Q5JS54 123 aa16.27■□□□□ 0.2
CASC3-207ENST00000581849 ACTL10Q5JWF8 245 aa16.27■□□□□ 0.2
CASC3-207ENST00000581849 Q8NAQ8 132 aa16.27■□□□□ 0.2
CASC3-207ENST00000581849 CIB3Q96Q77 187 aaPredicted RBP16.27■□□□□ 0.2
CASC3-207ENST00000581849 RAB40CQ96S21 281 aa16.27■□□□□ 0.2
CASC3-207ENST00000581849 IGKV1D-37A0A075B6S9 117 aa16.26■□□□□ 0.19
CASC3-207ENST00000581849 ZNF705EA8MWA4 302 aaPredicted RBP16.26■□□□□ 0.19
CASC3-207ENST00000581849 MIFP14174 115 aa16.26■□□□□ 0.19
CASC3-207ENST00000581849 SPANXN2Q5MJ10 180 aa16.26■□□□□ 0.19
CASC3-207ENST00000581849 CENPSQ8N2Z9 138 aa16.26■□□□□ 0.19
CASC3-207ENST00000581849 C4BPBP20851 252 aa16.25■□□□□ 0.19
CASC3-207ENST00000581849 TCTAP57738 103 aa16.25■□□□□ 0.19
CASC3-207ENST00000581849 NANOS2P60321 138 aaKnown RBP16.25■□□□□ 0.19
CASC3-207ENST00000581849 RPP30P78346 268 aaKnown RBP16.25■□□□□ 0.19
CASC3-207ENST00000581849 PPP1R1AQ13522 171 aa16.25■□□□□ 0.19
CASC3-207ENST00000581849 C1orf194Q5T5A4 169 aa16.25■□□□□ 0.19
CASC3-207ENST00000581849 TRGV9Q99603 122 aa16.25■□□□□ 0.19
CASC3-207ENST00000581849 FBXL17Q9UF56 701 aa16.25■□□□□ 0.19
CASC3-207ENST00000581849 NUTF2P61970 127 aaKnown RBP16.24■□□□□ 0.19
CASC3-207ENST00000581849 LGALS9CQ6DKI2 356 aa16.24■□□□□ 0.19
CASC3-207ENST00000581849 C1QTNF4Q9BXJ3 329 aa16.24■□□□□ 0.19
CASC3-207ENST00000581849 SRRQ9GZT4 340 aa16.24■□□□□ 0.19
CASC3-207ENST00000581849 NAP1L6A6NFF2 107 aa16.23■□□□□ 0.19
CASC3-207ENST00000581849 SNRPGP15A8MWD9 76 aa16.23■□□□□ 0.19
CASC3-207ENST00000581849 CFDP00746 253 aaPredicted RBP16.23■□□□□ 0.19
CASC3-207ENST00000581849 NKX2-1P43699 371 aaPredicted RBP16.23■□□□□ 0.19
CASC3-207ENST00000581849 ZNF90Q03938 601 aa16.23■□□□□ 0.19
CASC3-207ENST00000581849 THAP8Q8NA92 274 aa16.23■□□□□ 0.19
CASC3-207ENST00000581849 CSNK1G2-AS1Q8NCQ2 148 aa16.23■□□□□ 0.19
CASC3-207ENST00000581849 PBDC1Q9BVG4 233 aa16.23■□□□□ 0.19
CASC3-207ENST00000581849 C11orf94C9JXX5 98 aa16.22■□□□□ 0.19
CASC3-207ENST00000581849 SYNGR2O43760 224 aa16.22■□□□□ 0.19
CASC3-207ENST00000581849 IAPPP10997 89 aa16.22■□□□□ 0.19
CASC3-207ENST00000581849 X6R8D5 127 aa16.22■□□□□ 0.19
CASC3-207ENST00000581849 IGHV4-28A0A0C4DH34 117 aa16.21■□□□□ 0.19
CASC3-207ENST00000581849 H3BMM0 161 aa16.21■□□□□ 0.19
CASC3-207ENST00000581849 TBC1D24Q9ULP9 559 aa16.21■□□□□ 0.19
CASC3-207ENST00000581849 PRSS46E5RG02 174 aa16.2■□□□□ 0.18
CASC3-207ENST00000581849 DEFB4AO15263 64 aa16.2■□□□□ 0.18
CASC3-207ENST00000581849 RBMY1A1P0DJD3 496 aaKnown RBP16.2■□□□□ 0.18
CASC3-207ENST00000581849 RBMY1CP0DJD4 496 aa16.2■□□□□ 0.18
CASC3-207ENST00000581849 HLA-DRB4P13762 266 aa16.2■□□□□ 0.18
CASC3-207ENST00000581849 RBMY1FQ15415 496 aaKnown RBP16.2■□□□□ 0.18
CASC3-207ENST00000581849 SAMD13Q5VXD3 122 aa16.2■□□□□ 0.18
CASC3-207ENST00000581849 C2CD4CQ8TF44 421 aa16.2■□□□□ 0.18
CASC3-207ENST00000581849 SLC45A2Q9UMX9 530 aa16.2■□□□□ 0.18
CASC3-207ENST00000581849 HLA-DRB4X5D2U9 266 aa16.2■□□□□ 0.18
CASC3-207ENST00000581849 IGKV1OR2-108A0A075B7D4 117 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 NDUFB6O95139 128 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 HOXB5P09067 269 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 ID1P41134 155 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 INPP1P49441 399 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 PSMB3P49720 205 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 LYZP61626 148 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 GGNBP1Q5YKI7 109 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 CLUHP3Q96NS8 147 aa16.19■□□□□ 0.18
CASC3-207ENST00000581849 TRIQKQ629K1 86 aa16.18■□□□□ 0.18
CASC3-207ENST00000581849 PAIP2BQ9ULR5 123 aaKnown RBP16.18■□□□□ 0.18
CASC3-207ENST00000581849 C9orf170A2RU37 121 aa16.17■□□□□ 0.18
CASC3-207ENST00000581849 WRBO00258 174 aa16.17■□□□□ 0.18
CASC3-207ENST00000581849 SOCS3O14543 225 aa16.17■□□□□ 0.18
CASC3-207ENST00000581849 ID3Q02535 119 aa16.17■□□□□ 0.18
CASC3-207ENST00000581849 SPATA31B1PQ5VZV4 182 aa16.17■□□□□ 0.18
CASC3-207ENST00000581849 MAGT1Q9H0U3 335 aa16.17■□□□□ 0.18
CASC3-207ENST00000581849 CLEC5AQ9NY25 188 aa16.17■□□□□ 0.18
CASC3-207ENST00000581849 S100A7P31151 101 aa16.16■□□□□ 0.18
CASC3-207ENST00000581849 MEOX2P50222 304 aa16.16■□□□□ 0.18
CASC3-207ENST00000581849 OR2F1Q13607 317 aa16.16■□□□□ 0.18
CASC3-207ENST00000581849 BAK1Q16611 211 aa16.16■□□□□ 0.18
CASC3-207ENST00000581849 FOXI2Q6ZQN5 318 aa16.16■□□□□ 0.18
CASC3-207ENST00000581849 COQ8AQ8NI60 647 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms