RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	IL7	P13232	177 aa		9.27	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	RPL35A	P18077	110 aa	Known RBP	9.27	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	DEFB131A	P59861	70 aa		9.27	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	GAMT	Q14353	236 aa		9.27	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	USF2	Q15853	346 aa	Predicted RBP	9.27	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	STXBP6	Q8NFX7	210 aa		9.27	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	RNF125	Q96EQ8	232 aa		9.27	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	TRGV9	Q99603	122 aa		9.27	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SNRPGP15	A8MWD9	76 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	HOXB5	P09067	269 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	OR4E1	P0C645	316 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	S100A7	P31151	101 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	ID3	Q02535	119 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	C1orf194	Q5T5A4	169 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	GGNBP1	Q5YKI7	109 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	MORN3	Q6PF18	240 aa	Predicted RBP	9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	LYG2	Q86SG7	212 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	STH	Q8IWL8	128 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SDHC	Q99643	169 aa	Predicted RBP	9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	FBXL17	Q9UF56	701 aa		9.26	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	JTB	O76095	146 aa		9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SPP1	P10451	314 aa		9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SNRPD3	P62318	126 aa	Known RBP	9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	DHRS2	Q13268	280 aa		9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SAMD13	Q5VXD3	122 aa		9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	THAP8	Q8NA92	274 aa		9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	NRN1	Q9NPD7	142 aa		9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SLC45A2	Q9UMX9	530 aa		9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	STRAP	Q9Y3F4	350 aa	Known RBP	9.25	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	IGKV1D-37	A0A075B6S9	117 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708		A0A0J9YWU9	116 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	NUPR2	A6NF83	97 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	WRB	O00258	174 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	IAPP	P10997	89 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	BTC	P35070	178 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	NKX2-1	P43699	371 aa	Predicted RBP	9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	ZNF124	Q15973	351 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	C4orf46	Q504U0	113 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SIGLEC15	Q6ZMC9	328 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	TRPT1	Q86TN4	253 aa	Known RBP	9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	RARRES2	Q99969	163 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	CCDC32	Q9BV29	185 aa		9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	C11orf68	Q9H3H3	251 aa	Known RBP	9.24	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	PRSS46	E5RG02	174 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	CA1	P00915	261 aa	Predicted RBP	9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	ZNF688	P0C7X2	276 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	LEMD1	Q68G75	181 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	FAM24B	Q8N5W8	94 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	OR4D5	Q8NGN0	318 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	MITD1	Q8WV92	249 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SMIM8	Q96KF7	97 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	MAGT1	Q9H0U3	335 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	FLVCR2	Q9UPI3	526 aa		9.23	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	FNDC10	F2Z333	226 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	LYRM1	O43325	122 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	ADAP1	O75689	374 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	TAS2R30	P59541	319 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	ZNF90	Q03938	601 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	SPANXN5	Q5MJ07	72 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	RAB40C	Q96S21	281 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	PBDC1	Q9BVG4	233 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	MFF	Q9GZY8	342 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	PAIP2B	Q9ULR5	123 aa	Known RBP	9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	STARD9	Q9P2P6	4700 aa		9.22	□□□□□ -0.93
CDK5RAP3-222	ENST00000581708	IGKV1OR2-108	A0A075B7D4	117 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	LINC00854	A0A1B0GVQ3	168 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PLA2G10	O15496	165 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ANXA7	P20073	488 aa	Known RBP	9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ID1	P41134	155 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	MEOX2	P50222	304 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	NUTF2	P61970	127 aa	Known RBP	9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	SPATA31B1P	Q5VZV4	182 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	TMEM144	Q7Z5S9	345 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	S100A7A	Q86SG5	101 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	BPIFC	Q8NFQ6	507 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	OR11H2	Q8NH07	326 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	GPR82	Q96P67	336 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	C1QTNF4	Q9BXJ3	329 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	RYR2	Q92736	4967 aa		9.21	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	CXorf65	A6NEN9	183 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	TSC22D2	O75157	780 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	TCRB	P04435	133 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PSMB3	P49720	205 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	LYZ	P61626	148 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	SELENOT	P62341	195 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	POLR2G	P62487	172 aa	Known RBP eCLIP	9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	IAH1	Q2TAA2	248 aa	Predicted RBP	9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PSMG4	Q5JS54	123 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	CEMP1	Q6PRD7	247 aa	Predicted RBP	9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	S100Z	Q8WXG8	99 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	CLUHP3	Q96NS8	147 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	C20orf85	Q9H1P6	137 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	PSENEN	Q9NZ42	101 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	RNF24	Q9Y225	148 aa		9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	KLK5	Q9Y337	293 aa	Predicted RBP	9.2	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ISLR	O14498	428 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	MIF	P14174	115 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	DLK1	P80370	383 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	AKR1C1	Q04828	323 aa		9.19	□□□□□ -0.94
CDK5RAP3-222	ENST00000581708	ACTL10	Q5JWF8	245 aa		9.19	□□□□□ -0.94

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