RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 DSCR9P59020 149 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CIARTQ8N365 385 aaPredicted RBP10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 STPG3Q8N7X2 389 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 C1orf159Q96HA4 380 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ACY3Q96HD9 319 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 AJUBAQ96IF1 538 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 BEX4Q9NWD9 120 aaPredicted RBP10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ZNF257Q9Y2Q1 563 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 SONP18583 2426 aaKnown RBP10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TRAV40A0A0B4J280 105 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 H7BYZ3 331 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ACTL6BO94805 426 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 NDUFB4O95168 129 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ARL14EPLP0DKL9 152 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 APELAP0DMC3 54 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 SLC25A16P16260 332 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 G0S2P27469 103 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MLANAQ16655 118 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TMEM177Q53S58 311 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TMEM160Q9NX00 188 aa10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 AMMECR1Q9Y4X0 333 aaPredicted RBP10.13□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TGFAP01135 160 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 HES1Q14469 280 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FAM71F2Q6NXP2 309 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 PDPNQ86YL7 162 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 OR5B3Q8NH48 314 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TMEM37Q8WXS4 190 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 C22orf15Q8WYQ4 148 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 OR5B12Q96R08 314 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FUT9Q9Y231 359 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 POLR3KQ9Y2Y1 108 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 B4DSR2 109 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 GATA2P23769 480 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 UBE2E1P51965 193 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 GNB1P62873 340 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ACTL10Q5JWF8 245 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FAM120AOSQ5T036 256 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TEX38Q6PEX7 206 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CFHR4Q92496 578 aa10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 SEPSECSQ9HD40 501 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 LSM4Q9Y4Z0 139 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FCN1O00602 326 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 VENTXO95231 258 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MC5RP33032 325 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ERHP84090 104 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CYB5R2Q6BCY4 276 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MRPL41Q8IXM3 137 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 OR1L8Q8NGR8 309 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TMEM18Q96B42 140 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 KCNIP2Q9NS61 270 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 AKAP9Q99996 3911 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TRBV20OR9-2A0A075B6H5 130 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 IGHV3-48P01763 117 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MRGPRG-AS1Q2M3A8 158 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FBXL15Q9H469 300 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ZNF430Q9H8G1 570 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MYO9AB2RTY4 2548 aa10.11□□□□□ -0.79
CDK5RAP3-217ENST00000580287 A0A1B0GUS0 222 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TMEM250H0YL14 139 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CEACAM3P40198 252 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 IQCJQ1A5X6 159 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 VSTM2AQ8TAG5 236 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 NPFFO15130 113 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 REG1AP05451 166 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 STAG3L3P0CL85 134 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 RNASE2P10153 161 aaKnown RBP10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 VMA21Q3ZAQ7 101 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 ASPHD1Q5U4P2 390 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 FAM78BQ5VT40 261 aa10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CITED2Q99967 270 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-217ENST00000580287 CXorf1O96002 111 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 OR10J1P30954 320 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 RHOBP62745 196 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 PSG5Q15238 335 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 MMDQ15546 238 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 KLF17Q5JT82 389 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 C19orf35Q6ZS72 473 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 RNF152Q8N8N0 203 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 NDUFA4L2Q9NRX3 87 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 M0R143 59 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 GGCTO75223 188 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 STAG3L2P0CL84 134 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 TMEM249Q2WGJ8 235 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 C2orf83Q53S99 150 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 LRRC75A-AS1Q8N1F1 130 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 GBGT1Q8N5D6 347 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 LINC01356Q8N9X3 169 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 OR2T10Q8NGZ9 312 aa10.09□□□□□ -0.79
CDK5RAP3-217ENST00000580287 IGKV1OR2-108A0A075B7D4 117 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SCO2A0A1W2PP80 73 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 CGB1A6NKQ9 187 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 IGHV4-31P0DP07 118 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 RPL29P47914 159 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 ERVFC1-1P60608 527 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 OR2T6Q8NHC8 308 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TMEM167AQ8TBQ9 72 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 IGHV1-69DA0A0B4J2H0 117 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 SCGB1D1O95968 90 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 IGHV1-69P01742 117 aa10.08□□□□□ -0.8
CDK5RAP3-217ENST00000580287 TYMSP04818 313 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms