RNA–Protein interactions for RNA: ENST00000579609.5

PPP4R1-213, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-213ENST00000579609 CNIH1O95406 144 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 TOMM40O96008 361 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 TRGC1P0CF51 173 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 PAX1P15863 534 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 GNLYP22749 145 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 S100A2P29034 98 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 RAB9AP51151 201 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 DSCR9P59020 149 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 LMO4P61968 165 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 SUMO1P63165 101 aaKnown RBP7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 PDE6HQ13956 83 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 FXYD3Q14802 87 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 TMEM183BQ1AE95 376 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 CT83Q5H943 113 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 WDR73Q6P4I2 378 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 TMEM183AQ8IXX5 376 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 VN1R17PQ8TDU5 208 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 ARPC1AQ92747 370 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 FRZBQ92765 325 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 IGF2BP2-AS1Q96M15 143 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 C12orf57Q99622 126 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 RASL11BQ9BPW5 248 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 DERL1Q9BUN8 251 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 WNT10AQ9GZT5 417 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 UBTD1Q9HAC8 227 aa7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 MRPL27Q9P0M9 148 aaKnown RBP7.03□□□□□ -1.28
PPP4R1-213ENST00000579609 IGLV11-55A0A075B6I3 123 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 SERTM2A0A1B0GWG4 89 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 A0A1W2PPQ1 181 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 A0A1W2PPR1 153 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 FAM231BA6NCW3 169 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 K7EIM0 57 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 PEX7O00628 323 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 TOX4O94842 621 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 BRI3O95415 125 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 HIST1H1EP10412 219 aaKnown RBP7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 GP9P14770 177 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 GATA2P23769 480 aaPredicted RBP7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 CNTFRP26992 372 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 CRYBB3P26998 211 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 MFAP4P55083 255 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 RPL15P61313 204 aaKnown RBP7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 MLANAQ16655 118 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 RPEL1Q2QD12 228 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 CENPWQ5EE01 88 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 LDLRAD2Q5SZI1 272 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 ZNF329Q86UD4 541 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 SGMS2Q8NHU3 365 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 FMC1Q96HJ9 113 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 PACRGQ96M98 296 aaPredicted RBP7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 FANCD2OSQ96PS1 177 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 ATG101Q9BSB4 218 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 PIMREGQ9BSJ6 248 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 ELOVL1Q9BW60 279 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 OTORQ9NRC9 128 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 SOX21Q9Y651 276 aaPredicted RBP7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 BSNQ9UPA5 3926 aa7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 ASH1LQ9NR48 2969 aaKnown RBP7.02□□□□□ -1.29
PPP4R1-213ENST00000579609 ITPR1Q14643 2758 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 WI2-2373I1.2A0A1W2PRP0 233 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 WIPF1O43516 503 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 ZNF253O75346 499 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 IGLV2-8P01709 118 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 NBEAP1P0C6P0 100 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 CDKN1AP38936 164 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 CRIP2P52943 208 aaPredicted RBP7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 NDUFA6P56556 154 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 CX3CL1P78423 397 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 ZNF90Q03938 601 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 BPIFA4PQ86YQ2 179 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 HIST3H2BBQ8N257 126 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 WIPF2Q8TF74 440 aaPredicted RBP7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 SHANK2-AS3Q9BTD1 123 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 MRPL18Q9H0U6 180 aaKnown RBP7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 MRPL36Q9P0J6 103 aaKnown RBP7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 ZNF492Q9P255 531 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 EPDR1Q9UM22 224 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 DMRT1Q9Y5R6 373 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 V9GYV3 84 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 NAV3Q8IVL0 2385 aa7.01□□□□□ -1.29
PPP4R1-213ENST00000579609 IGSF10Q6WRI0 2623 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 HIVEP3Q5T1R4 2406 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 SPENQ96T58 3664 aaKnown RBP7□□□□□ -1.29
PPP4R1-213ENST00000579609 VWC2LB2RUY7 222 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 H3BRN7 92 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 K7EN84 100 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 FCN1O00602 326 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 NDUFB8O95169 186 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 IGKV1-17P01599 117 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 REG1AP05451 166 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 RD3LP0DJH9 198 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 PSG1P11464 419 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 TMEM11P17152 192 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 GATA3P23771 443 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 ZFP36P26651 326 aaKnown RBP7□□□□□ -1.29
PPP4R1-213ENST00000579609 ERVFC1-1P60608 527 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 PAX8Q06710 450 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 HES1Q14469 280 aa7□□□□□ -1.29
PPP4R1-213ENST00000579609 IBA57Q5T440 356 aaKnown RBP7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms