RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 S100ZQ8WXG8 99 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 TRGV9Q99603 122 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 MAGT1Q9H0U3 335 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 C20orf85Q9H1P6 137 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 RABAC1Q9UI14 185 aa10.96□□□□□ -0.65
SS18-212ENST00000579061 CSMD3Q7Z407 3707 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 PRSS46E5RG02 174 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 SPRY2O43597 315 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 BUB3O43684 328 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 TCRBP04435 133 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 RPL35AP18077 110 aaKnown RBP10.95□□□□□ -0.66
SS18-212ENST00000579061 NKX2-1P43699 371 aaPredicted RBP10.95□□□□□ -0.66
SS18-212ENST00000579061 DEFB131AP59861 70 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 OR8G2PQ6IF36 304 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 THAP8Q8NA92 274 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 STXBP6Q8NFX7 210 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 OR4D5Q8NGN0 318 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 DCANP1Q8TF63 244 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 MITD1Q8WV92 249 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 RNF183Q96D59 192 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 RNF125Q96EQ8 232 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 PFDN2Q9UHV9 154 aa10.95□□□□□ -0.66
SS18-212ENST00000579061 PAIP2BQ9ULR5 123 aaKnown RBP10.95□□□□□ -0.66
SS18-212ENST00000579061 STRAPQ9Y3F4 350 aaKnown RBP10.95□□□□□ -0.66
SS18-212ENST00000579061 A6NHS1 94 aa10.94□□□□□ -0.66
SS18-212ENST00000579061 MPTX1A8MV57 137 aa10.94□□□□□ -0.66
SS18-212ENST00000579061 ZNF124Q15973 351 aa10.94□□□□□ -0.66
SS18-212ENST00000579061 SPANXN5Q5MJ07 72 aa10.94□□□□□ -0.66
SS18-212ENST00000579061 CSTL1Q9H114 145 aa10.94□□□□□ -0.66
SS18-212ENST00000579061 SEPSECSQ9HD40 501 aaKnown RBP10.94□□□□□ -0.66
SS18-212ENST00000579061 AGRNO00468 2067 aa10.93□□□□□ -0.66
SS18-212ENST00000579061 SNRPGP15A8MWD9 76 aa10.93□□□□□ -0.66
SS18-212ENST00000579061 CFDP00746 253 aaPredicted RBP10.93□□□□□ -0.66
SS18-212ENST00000579061 POLR2GP62487 172 aaKnown RBP eCLIP10.93□□□□□ -0.66
SS18-212ENST00000579061 ZNF90Q03938 601 aa10.93□□□□□ -0.66
SS18-212ENST00000579061 DEFB135Q30KP9 77 aa10.93□□□□□ -0.66
SS18-212ENST00000579061 FAM24BQ8N5W8 94 aa10.93□□□□□ -0.66
SS18-212ENST00000579061 SMIM8Q96KF7 97 aa10.93□□□□□ -0.66
SS18-212ENST00000579061 STARD9Q9P2P6 4700 aa10.92□□□□□ -0.66
SS18-212ENST00000579061 IGKV1OR2-108A0A075B7D4 117 aa10.92□□□□□ -0.66
SS18-212ENST00000579061 IAH1Q2TAA2 248 aaPredicted RBP10.92□□□□□ -0.66
SS18-212ENST00000579061 ZFAND6Q6FIF0 208 aa10.92□□□□□ -0.66
SS18-212ENST00000579061 SIGLEC15Q6ZMC9 328 aa10.92□□□□□ -0.66
SS18-212ENST00000579061 GATAD1Q8WUU5 269 aa10.92□□□□□ -0.66
SS18-212ENST00000579061 PSENENQ9NZ42 101 aa10.92□□□□□ -0.66
SS18-212ENST00000579061 DYNC2H1Q8NCM8 4307 aaKnown RBP10.92□□□□□ -0.66
SS18-212ENST00000579061 H3BP45 60 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 TAS2R30P59541 319 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 C1orf194Q5T5A4 169 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 LEMD1Q68G75 181 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 TMEM144Q7Z5S9 345 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 STHQ8IWL8 128 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 ZBTB8BQ8NAP8 495 aaPredicted RBP10.91□□□□□ -0.66
SS18-212ENST00000579061 RAB40CQ96S21 281 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 PBDC1Q9BVG4 233 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 NRN1Q9NPD7 142 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 NUDT15Q9NV35 164 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 FBXL17Q9UF56 701 aa10.91□□□□□ -0.66
SS18-212ENST00000579061 TRAV6A0A075B6T7 132 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 FAM240BA0A1B0GVZ2 78 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 PMS2P5A8MQ11 134 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 SSSCA1O60232 199 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 ZNF688P0C7X2 276 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 ATF4P18848 351 aaPredicted RBP10.9□□□□□ -0.66
SS18-212ENST00000579061 PAX9P55771 341 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 LYZP61626 148 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 MZT2BQ6NZ67 158 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 ZNF431Q8TF32 576 aaPredicted RBP10.9□□□□□ -0.66
SS18-212ENST00000579061 WDR12Q9GZL7 423 aaKnown RBP10.9□□□□□ -0.66
SS18-212ENST00000579061 PTTG2Q9NZH5 202 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 SLC45A2Q9UMX9 530 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 TENM2Q9NT68 2774 aa10.9□□□□□ -0.66
SS18-212ENST00000579061 FNDC10F2Z333 226 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 TSC22D2O75157 780 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 H2AFB2P0C5Z0 115 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 SNRPD3P62318 126 aaKnown RBP10.89□□□□□ -0.67
SS18-212ENST00000579061 AKR1C1Q04828 323 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 ASAH1Q13510 395 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 OR2F1Q13607 317 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 TMEM41BQ5BJD5 291 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 MORN3Q6PF18 240 aaPredicted RBP10.89□□□□□ -0.67
SS18-212ENST00000579061 TMEM14EPQ6UXP3 125 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 ACOT7LQ6ZUV0 252 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 TRPT1Q86TN4 253 aaKnown RBP10.89□□□□□ -0.67
SS18-212ENST00000579061 BPIFCQ8NFQ6 507 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 GSKIPQ9P0R6 139 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 TBC1D24Q9ULP9 559 aa10.89□□□□□ -0.67
SS18-212ENST00000579061 SCGB1D2O95969 90 aa10.88□□□□□ -0.67
SS18-212ENST00000579061 CA1P00915 261 aaPredicted RBP10.88□□□□□ -0.67
SS18-212ENST00000579061 SPP1P10451 314 aa10.88□□□□□ -0.67
SS18-212ENST00000579061 S100A7P31151 101 aa10.88□□□□□ -0.67
SS18-212ENST00000579061 DLK1P80370 383 aa10.88□□□□□ -0.67
SS18-212ENST00000579061 ZNF846Q147U1 533 aa10.88□□□□□ -0.67
SS18-212ENST00000579061 C12orf45Q8N5I9 185 aaPredicted RBP10.88□□□□□ -0.67
SS18-212ENST00000579061 RCL1Q9Y2P8 373 aaKnown RBP10.88□□□□□ -0.67
SS18-212ENST00000579061 LYSTQ99698 3801 aa10.88□□□□□ -0.67
SS18-212ENST00000579061 A0A0J9YWU9 116 aa10.87□□□□□ -0.67
SS18-212ENST00000579061 UPK1BO75841 260 aa10.87□□□□□ -0.67
SS18-212ENST00000579061 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
SS18-212ENST00000579061 PSMG4Q5JS54 123 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms