RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 LRTM2Q8N967 370 aa8.41□□□□□ -1.06
SSH2-208ENST00000579040 Q8NAQ8 132 aa8.41□□□□□ -1.06
SSH2-208ENST00000579040 OR51G1Q8NGK1 321 aa8.41□□□□□ -1.06
SSH2-208ENST00000579040 SLC35E1Q96K37 410 aa8.41□□□□□ -1.06
SSH2-208ENST00000579040 HRH4Q9H3N8 390 aa8.41□□□□□ -1.06
SSH2-208ENST00000579040 NRN1Q9NPD7 142 aa8.41□□□□□ -1.06
SSH2-208ENST00000579040 V9GYH0 126 aa8.41□□□□□ -1.06
SSH2-208ENST00000579040 ALMS1Q8TCU4 4167 aa8.41□□□□□ -1.06
SSH2-208ENST00000579040 KNCNA6PVL3 124 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 ZNF705EA8MWA4 302 aaPredicted RBP8.4□□□□□ -1.06
SSH2-208ENST00000579040 PITX3O75364 302 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 MIFP14174 115 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 TCTAP57738 103 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 NANOS2P60321 138 aaKnown RBP8.4□□□□□ -1.06
SSH2-208ENST00000579040 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 ACTL10Q5JWF8 245 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 LCE2DQ5TA82 110 aaPredicted RBP8.4□□□□□ -1.06
SSH2-208ENST00000579040 LGALS9CQ6DKI2 356 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 SIGLEC15Q6ZMC9 328 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 TMED4Q7Z7H5 227 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 RNF125Q96EQ8 232 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 RAB40CQ96S21 281 aa8.4□□□□□ -1.06
SSH2-208ENST00000579040 ZFP92A6NM28 416 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 C11orf94C9JXX5 98 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 MED6O75586 246 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 C4BPBP20851 252 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 VAMP1P23763 118 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 NUTF2P61970 127 aaKnown RBP8.39□□□□□ -1.07
SSH2-208ENST00000579040 RAB11AP62491 216 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 GAMTQ14353 236 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 ZNF79Q15937 498 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 CCDC190Q86UF4 302 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 CIB3Q96Q77 187 aaPredicted RBP8.39□□□□□ -1.07
SSH2-208ENST00000579040 C1QTNF4Q9BXJ3 329 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 FBXL17Q9UF56 701 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 TMED3Q9Y3Q3 217 aa8.39□□□□□ -1.07
SSH2-208ENST00000579040 IGKV1D-37A0A075B6S9 117 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 IGHV4-28A0A0C4DH34 117 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 CCDC160A6NGH7 325 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 DEFB4AO15263 64 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 UBE2MP61081 183 aaKnown RBP8.38□□□□□ -1.07
SSH2-208ENST00000579040 RPP30P78346 268 aaKnown RBP8.38□□□□□ -1.07
SSH2-208ENST00000579040 C1orf194Q5T5A4 169 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 CENPSQ8N2Z9 138 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 CSNK1G2-AS1Q8NCQ2 148 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 C2CD4CQ8TF44 421 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 TRGV9Q99603 122 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 PBDC1Q9BVG4 233 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 TBC1D24Q9ULP9 559 aa8.38□□□□□ -1.07
SSH2-208ENST00000579040 H3BMM0 161 aa8.37□□□□□ -1.07
SSH2-208ENST00000579040 ZNF701M0R085 212 aaPredicted RBP8.37□□□□□ -1.07
SSH2-208ENST00000579040 SFT2D2O95562 160 aa8.37□□□□□ -1.07
SSH2-208ENST00000579040 RBMY1A1P0DJD3 496 aaKnown RBP8.37□□□□□ -1.07
SSH2-208ENST00000579040 RBMY1CP0DJD4 496 aa8.37□□□□□ -1.07
SSH2-208ENST00000579040 NKX2-1P43699 371 aaPredicted RBP8.37□□□□□ -1.07
SSH2-208ENST00000579040 PPP1R1AQ13522 171 aa8.37□□□□□ -1.07
SSH2-208ENST00000579040 RBMY1FQ15415 496 aaKnown RBP8.37□□□□□ -1.07
SSH2-208ENST00000579040 SPANXN2Q5MJ10 180 aa8.37□□□□□ -1.07
SSH2-208ENST00000579040 X6R8D5 127 aa8.37□□□□□ -1.07
SSH2-208ENST00000579040 SNRPGP15A8MWD9 76 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 SYNGR2O43760 224 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 CFDP00746 253 aaPredicted RBP8.36□□□□□ -1.07
SSH2-208ENST00000579040 IAPPP10997 89 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 ID1P41134 155 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 PSMB3P49720 205 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 LYZP61626 148 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 ZNF90Q03938 601 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 SAMD13Q5VXD3 122 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 THAP8Q8NA92 274 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 RBM38Q9H0Z9 239 aaKnown RBP8.36□□□□□ -1.07
SSH2-208ENST00000579040 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
SSH2-208ENST00000579040 NAP1L6A6NFF2 107 aa8.35□□□□□ -1.07
SSH2-208ENST00000579040 SPATA31B1PQ5VZV4 182 aa8.35□□□□□ -1.07
SSH2-208ENST00000579040 GGNBP1Q5YKI7 109 aa8.35□□□□□ -1.07
SSH2-208ENST00000579040 CLUHP3Q96NS8 147 aa8.35□□□□□ -1.07
SSH2-208ENST00000579040 SRRQ9GZT4 340 aa8.35□□□□□ -1.07
SSH2-208ENST00000579040 CLEC5AQ9NY25 188 aa8.35□□□□□ -1.07
SSH2-208ENST00000579040 PAIP2BQ9ULR5 123 aaKnown RBP8.35□□□□□ -1.07
SSH2-208ENST00000579040 SLC45A2Q9UMX9 530 aa8.35□□□□□ -1.07
SSH2-208ENST00000579040 PLECQ15149 4684 aaKnown RBP8.34□□□□□ -1.07
SSH2-208ENST00000579040 IGKV1OR2-108A0A075B7D4 117 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 TRAV10A0A0B4J240 114 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 PRSS46E5RG02 174 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 ISLRO14498 428 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 SOCS3O14543 225 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 HOXB5P09067 269 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 HLA-DMBP28068 263 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 S100A7P31151 101 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 INPP1P49441 399 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 MEOX2P50222 304 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 OR2F1Q13607 317 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 FOXI2Q6ZQN5 318 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 OR8I2Q8N0Y5 310 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 PPP1R14BQ96C90 147 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 MAGT1Q9H0U3 335 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 SAV1Q9H4B6 383 aaPredicted RBP8.34□□□□□ -1.07
SSH2-208ENST00000579040 XCL2Q9UBD3 114 aa8.34□□□□□ -1.07
SSH2-208ENST00000579040 ELOA3CA0A087WX78 387 aaPredicted RBP8.33□□□□□ -1.08
SSH2-208ENST00000579040 WRBO00258 174 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 281.3 ms