RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 RND2P52198 227 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 SYNJ2BPP57105 145 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 DLK1P80370 383 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 USF2Q15853 346 aaPredicted RBP2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 FAM209BQ5JX69 171 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 FAM90A2PQ658T7 463 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 SPSB3Q6PJ21 355 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 TOMM20LQ6UXN7 152 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 GSG1LQ6UXU4 331 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 ACOT7LQ6ZUV0 252 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 TMEM252Q8N6L7 170 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 Q8N9P0 234 aaPredicted RBP2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 UXS1Q8NBZ7 420 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 OR9G4Q8NGQ1 327 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 PPP1R1CQ8WVI7 109 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 CACNG8Q8WXS5 425 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 ST6GAL2Q96JF0 529 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 CIB3Q96Q77 187 aaPredicted RBP2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 PDCD10Q9BUL8 212 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 RANGRFQ9HD47 186 aaPredicted RBP2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 ZNF355PQ9NSJ1 428 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 MLXQ9UH92 298 aa2.85□□□□□ -1.95
SMARCE1-215ENST00000578995 TGP01266 2768 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 IGHV3-35A0A0C4DH35 117 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 C5orf51A6NDU8 294 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 FAM25EA8MYX2 175 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 K7EMT4 169 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 NDUFA4O00483 81 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 OVOL1O14753 267 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 MED6O75586 246 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 LY86O95711 162 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 SCGB1D2O95969 90 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 TOMM40O96008 361 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 IFNA10P01566 189 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 APOHP02749 345 aaPredicted RBP2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 LINC00869P0C866 280 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 SLC25A4P12235 298 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 DEFA4P12838 97 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 ZP3P21754 424 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 CBLN1P23435 193 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 SNCAP37840 140 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 OPRK1P41145 380 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 P2RY1P47900 373 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 MFAP4P55083 255 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 ELLP55199 621 aaPredicted RBP2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 YPEL3P61236 119 aaPredicted RBP2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 EWSR1Q01844 656 aaKnown RBP eCLIP2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 NHLH2Q02577 135 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 ZNF90Q03938 601 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 CD300CQ08708 224 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 TIGITQ495A1 244 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 TM4SF20Q53R12 229 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 SPANXN5Q5MJ07 72 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 PATE2Q6UY27 113 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 TMEM144Q7Z5S9 345 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 LILRB2Q8N423 598 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 OR11H4Q8NGC9 324 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 NPIPB3Q92617 1050 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 PINX1Q96BK5 328 aaKnown RBP2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 TRGV9Q99603 122 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 MGST2Q99735 147 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 HIPK2Q9H2X6 1198 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 VSIRQ9H7M9 311 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 WFDC1Q9HC57 220 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 PSENENQ9NZ42 101 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 THYN1Q9P016 225 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 GSKIPQ9P0R6 139 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 MBD2Q9UBB5 411 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 WDR83OSQ9Y284 106 aa2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 STRAPQ9Y3F4 350 aaKnown RBP2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 LSM5Q9Y4Y9 91 aaKnown RBP2.84□□□□□ -1.95
SMARCE1-215ENST00000578995 STAB2Q8WWQ8 2551 aa2.84□□□□□ -1.96
SMARCE1-215ENST00000578995 IGHV3OR16-8A0A075B7F1 116 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 IGHV7-4-1A0A0J9YVY3 117 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 RPS10-NUDT3A0A1W2PQS6 291 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 ZNF785A8K8V0 405 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 SEC14L6B5MCN3 397 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 E5RGE8 158 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 SMLR1H3BR10 107 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 CHEK1O14757 476 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 MRPS12O15235 138 aaKnown RBP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 SSNA1O43805 119 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 GNG7O60262 68 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 CST7O76096 145 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 PSG1P11464 419 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 FOLR2P14207 255 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 GATA2P23769 480 aaPredicted RBP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 CRYBB3P26998 211 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 OR10J1P30954 320 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 NPBWR1P48145 328 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 SULT1A1P50225 295 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 SUB1P53999 127 aaKnown RBP eCLIP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 PLP1P60201 277 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 S100A10P60903 97 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 RAP2BP61225 183 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 CYCSP99999 105 aaKnown RBP2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 SLC38A11Q08AI6 406 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 OPCMLQ14982 345 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 RPEL1Q2QD12 228 aa2.83□□□□□ -1.96
SMARCE1-215ENST00000578995 DEFB114Q30KQ6 69 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms