RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 TRAV25A0A0B4J276 109 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 IGSF23A1L1A6 192 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 H0YIZ8 118 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 IL4P05112 153 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 SLC38A11Q08AI6 406 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 OR2F1Q13607 317 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 DEFB121Q5J5C9 76 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 LAMTOR1Q6IAA8 161 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 RBPMS2Q6ZRY4 209 aaKnown RBP11.59□□□□□ -0.55
IFT20-208ENST00000578985 TMEM252Q8N6L7 170 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 OR11H7Q8NGC8 314 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 ST8SIA2Q92186 375 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 OR5AC2Q9NZP5 309 aa11.59□□□□□ -0.55
IFT20-208ENST00000578985 MPC2O95563 127 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 APOHP02749 345 aaPredicted RBP11.58□□□□□ -0.56
IFT20-208ENST00000578985 CRYBB3P26998 211 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 P2RY1P47900 373 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 SULT1A1P50225 295 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 USF2Q15853 346 aaPredicted RBP11.58□□□□□ -0.56
IFT20-208ENST00000578985 STX12Q86Y82 276 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 TMEM217Q8N7C4 229 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 NARS2Q96I59 477 aaKnown RBP11.58□□□□□ -0.56
IFT20-208ENST00000578985 RNF2Q99496 336 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 RNF126Q9BV68 326 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 TMEM231Q9H6L2 316 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 VSIRQ9H7M9 311 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 NPVFQ9HCQ7 196 aa11.58□□□□□ -0.56
IFT20-208ENST00000578985 IGHV3-66A0A0C4DH42 116 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 A0A1W2PS18 150 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 HNRNPCP07910 306 aaKnown RBP eCLIP11.57□□□□□ -0.56
IFT20-208ENST00000578985 PET100P0DJ07 73 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 CYP2G1PQ6ZSU1 146 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 GTSCR1Q86UQ5 136 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 RNF125Q96EQ8 232 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 SLC25A31Q9H0C2 315 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 RABAC1Q9UI14 185 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 LSM4Q9Y4Z0 139 aaKnown RBP11.57□□□□□ -0.56
IFT20-208ENST00000578985 U3KQE9 123 aa11.57□□□□□ -0.56
IFT20-208ENST00000578985 TSPAN4O14817 238 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 CFDP00746 253 aaPredicted RBP11.56□□□□□ -0.56
IFT20-208ENST00000578985 S100A11P31949 105 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 LYZP61626 148 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 HBG1P69891 147 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 HBG2P69892 147 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 TEPPQ6URK8 271 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 TCF24Q7RTU0 167 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 Q8N1Y9 231 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 LILRB2Q8N423 598 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 GRAMD2BQ96HH9 432 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 PBDC1Q9BVG4 233 aa11.56□□□□□ -0.56
IFT20-208ENST00000578985 CD5P06127 495 aa11.55□□□□□ -0.56
IFT20-208ENST00000578985 GATA2P23769 480 aaPredicted RBP11.55□□□□□ -0.56
IFT20-208ENST00000578985 EIF2B2P49770 351 aaKnown RBP11.55□□□□□ -0.56
IFT20-208ENST00000578985 EWSR1Q01844 656 aaKnown RBP eCLIP11.55□□□□□ -0.56
IFT20-208ENST00000578985 NHLH2Q02577 135 aa11.55□□□□□ -0.56
IFT20-208ENST00000578985 FAM90A2PQ658T7 463 aa11.55□□□□□ -0.56
IFT20-208ENST00000578985 TMEM182Q6ZP80 229 aaPredicted RBP11.55□□□□□ -0.56
IFT20-208ENST00000578985 BPIFCQ8NFQ6 507 aa11.55□□□□□ -0.56
IFT20-208ENST00000578985 SPAG8Q99932 426 aaPredicted RBP11.55□□□□□ -0.56
IFT20-208ENST00000578985 TMEM147Q9BVK8 224 aa11.55□□□□□ -0.56
IFT20-208ENST00000578985 UQCC1Q9NVA1 299 aa11.55□□□□□ -0.56
IFT20-208ENST00000578985 MBD2Q9UBB5 411 aa11.55□□□□□ -0.56
IFT20-208ENST00000578985 SMAD5-AS1Q9Y6J3 95 aa11.55□□□□□ -0.56
IFT20-208ENST00000578985 DFFBO76075 338 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 GIPP09681 153 aaPredicted RBP11.54□□□□□ -0.56
IFT20-208ENST00000578985 CD81P60033 236 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 SELENOTP62341 195 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 ATP6V1FQ16864 119 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 VWC2Q2TAL6 325 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 THAP6Q8TBB0 222 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 ASB13Q8WXK3 278 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 NEURL2Q9BR09 285 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 PFDN2Q9UHV9 154 aa11.54□□□□□ -0.56
IFT20-208ENST00000578985 IGKV3-7A0A075B6H7 116 aa11.53□□□□□ -0.56
IFT20-208ENST00000578985 OR4C46A6NHA9 309 aa11.53□□□□□ -0.56
IFT20-208ENST00000578985 CD7P09564 240 aa11.53□□□□□ -0.56
IFT20-208ENST00000578985 NUP62P37198 522 aaPredicted RBP11.53□□□□□ -0.56
IFT20-208ENST00000578985 RPL11P62913 178 aaKnown RBP11.53□□□□□ -0.56
IFT20-208ENST00000578985 BAXQ07812 192 aa11.53□□□□□ -0.56
IFT20-208ENST00000578985 RAB31Q13636 194 aa11.53□□□□□ -0.56
IFT20-208ENST00000578985 C16orf54Q6UWD8 224 aa11.53□□□□□ -0.56
IFT20-208ENST00000578985 PRKDCP78527 4128 aaKnown RBP11.53□□□□□ -0.56
IFT20-208ENST00000578985 UBE2L5PA0A1B0GUS4 154 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 AGPAT2O15120 278 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 LYL1P12980 280 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 ORM2P19652 201 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 RAP2BP61225 183 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 PAFAH1B2P68402 229 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 ZNF546Q86UE3 836 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 GBGT1Q8N5D6 347 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 OR5C1Q8NGR4 320 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 GLMPQ8WWB7 406 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 PPP1R14BQ96C90 147 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 MGST2Q99735 147 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 SLC45A2Q9UMX9 530 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 WDR83OSQ9Y284 106 aa11.52□□□□□ -0.57
IFT20-208ENST00000578985 HELTA6NFD8 242 aa11.51□□□□□ -0.57
IFT20-208ENST00000578985 BUB3O43684 328 aa11.51□□□□□ -0.57
IFT20-208ENST00000578985 LINC00869P0C866 280 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms