RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 YPEL3P61236 119 aaPredicted RBP8.85□□□□□ -0.99
SEC22B-201ENST00000578049 ZFP36L1Q07352 338 aaKnown RBP8.85□□□□□ -0.99
SEC22B-201ENST00000578049 GAGE1Q13065 139 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 GUSBP1Q15486 140 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 NUP35Q8NFH5 326 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 SPTBN1Q01082 2364 aaKnown RBP8.85□□□□□ -0.99
SEC22B-201ENST00000578049 ESDP10768 282 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 FAM27E3Q08E93 113 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 CCL3L1P16619 93 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 BSPH1Q075Z2 132 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 DOCK3Q8IZD9 2030 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 LCTP09848 1927 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 PSMB11A5LHX3 300 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 A6NNC1 897 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 C15orf62A8K5M9 175 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 ETV2O00321 342 aaPredicted RBP8.85□□□□□ -0.99
SEC22B-201ENST00000578049 SP9P0CG40 484 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 C9orf139Q6ZV77 190 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 GGNQ86UU5 652 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 C9orf106Q8NAJ2 232 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 OVOL2Q9BRP0 275 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 NCOR1P1Q9H4R4 102 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 SLC25A15Q9Y619 301 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 CELA3BP08861 270 aa8.85□□□□□ -0.99
SEC22B-201ENST00000578049 CLEC19AQ6UXS0 136 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 S100A7L2Q5SY68 101 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 FAM201AQ5SY85 155 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 IL18BPO95998 194 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 IGHV3OR16-13A0A075B7E8 117 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 IGHV3-74A0A0B4J1X5 117 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 ATP5J2P56134 94 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 DUX3Q96PT4 197 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 PEMTQ9UBM1 199 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 EP300Q09472 2414 aaPredicted RBP8.84□□□□□ -0.99
SEC22B-201ENST00000578049 NYNRINQ9P2P1 1898 aaKnown RBP8.84□□□□□ -0.99
SEC22B-201ENST00000578049 CACNA1EQ15878 2313 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 SRSF6Q13247 344 aaKnown RBP8.84□□□□□ -0.99
SEC22B-201ENST00000578049 GAGE12BA1L429 117 aa8.84□□□□□ -0.99
SEC22B-201ENST00000578049 CHD5Q8TDI0 1954 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 FAM231DQ6ZW35 169 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 DOCK6Q96HP0 2047 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 D6R8Y8 96 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 Q6P435 159 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 CENPVQ7Z7K6 275 aaPredicted RBP8.83□□□□□ -1
SEC22B-201ENST00000578049 MBNL3Q9NUK0 354 aaKnown RBP8.83□□□□□ -1
SEC22B-201ENST00000578049 IGHV3OR16-12A0A075B7B8 117 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 PSPNO60542 156 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 HGFACQ04756 655 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 MUC21A0A0G2JKD1 596 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 MUC21A0A140T8X8 626 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 SMAD7O15105 426 aaKnown RBP8.83□□□□□ -1
SEC22B-201ENST00000578049 SLC25A20O43772 301 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 PSG1P11464 419 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 COX6B1P14854 86 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 RNASE4P34096 147 aaKnown RBP8.83□□□□□ -1
SEC22B-201ENST00000578049 FHL1Q13642 323 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 MUC21Q5SSG8 566 aa8.83□□□□□ -1
SEC22B-201ENST00000578049 EPOPA6NHQ4 379 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 CD7P09564 240 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 MINOS1Q5TGZ0 78 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 PLSCR4Q9NRQ2 329 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 MINOS1-NBL1R4GNA1 71 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 WNK2Q9Y3S1 2297 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 M0R2P5 195 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 CLPSP04118 112 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 RFNGQ9Y644 331 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 IGHV1-18A0A0C4DH31 117 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 GGTLC3B5MD39 225 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 NTN3O00634 580 aaPredicted RBP8.82□□□□□ -1
SEC22B-201ENST00000578049 RNASE1P07998 156 aaKnown RBP8.82□□□□□ -1
SEC22B-201ENST00000578049 NTF4P34130 210 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 ZNF138P52744 262 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 KIR3DS1Q14943 382 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 CSRP2Q16527 193 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 SPATA31B1PQ5VZV4 182 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 FGFBP3Q8TAT2 258 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 RNASE6Q93091 150 aaKnown RBP8.82□□□□□ -1
SEC22B-201ENST00000578049 RIPPLY3P57055 190 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 LY6EQ16553 131 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 CFAP161Q6P656 301 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 TMEM86BQ8N661 226 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 DPH3P1Q9H4G8 78 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 CRIM1Q9NZV1 1036 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 POLR3KQ9Y2Y1 108 aaPredicted RBP8.82□□□□□ -1
SEC22B-201ENST00000578049 PRR19A6NJB7 356 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 EREGO14944 169 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 SSBP2P81877 361 aaPredicted RBP8.82□□□□□ -1
SEC22B-201ENST00000578049 LINC00477Q96M19 166 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 JMJD8Q96S16 334 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 MESP1Q9BRJ9 268 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 VCYO14598 125 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 PSG3Q16557 428 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 ABCA1O95477 2261 aa8.82□□□□□ -1
SEC22B-201ENST00000578049 C9orf172C9J069 976 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 TMEM249Q2WGJ8 235 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 LYZL1Q6UWQ5 148 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 GREB1Q4ZG55 1949 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 TRAV5A0A0B4J249 113 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 C9JQL5 133 aa8.81□□□□□ -1
SEC22B-201ENST00000578049 IGHV1-46P01743 117 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 1012.8 ms