RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 C1QTNF4Q9BXJ3 329 aa10.56□□□□□ -0.72
SMARCE1-213ENST00000578044 NRN1Q9NPD7 142 aa10.56□□□□□ -0.72
SMARCE1-213ENST00000578044 IGHV3-66A0A0C4DH42 116 aa10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 LY6G6CO95867 125 aa10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 FABP1P07148 127 aa10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 NUTF2P61970 127 aaKnown RBP10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 USF2Q15853 346 aaPredicted RBP10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 LEMD1Q68G75 181 aa10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 CSNK1G2-AS1Q8NCQ2 148 aa10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 OR51G1Q8NGK1 321 aa10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 NPIPB3Q92617 1050 aa10.55□□□□□ -0.72
SMARCE1-213ENST00000578044 NXPH3O95157 252 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 CFDP00746 253 aaPredicted RBP10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 IFNA10P01566 189 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 IL4P05112 153 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 AKR1C4P17516 323 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 DHRS2Q13268 280 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 KLF9Q13886 244 aaPredicted RBP10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 LYZL2Q7Z4W2 148 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 MCFD2Q8NI22 146 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 TRIM63Q969Q1 353 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 FBXL17Q9UF56 701 aa10.54□□□□□ -0.72
SMARCE1-213ENST00000578044 ZNF688P0C7X2 276 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 PSG1P11464 419 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 NKX2-1P43699 371 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 UBE2MP61081 183 aaKnown RBP10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 SPATA31B1PQ5VZV4 182 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 C2CD4CQ8TF44 421 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 RNF125Q96EQ8 232 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 CIB3Q96Q77 187 aaPredicted RBP10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 RAB40CQ96S21 281 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 MCUBQ9NWR8 336 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 SLC45A2Q9UMX9 530 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 TMED3Q9Y3Q3 217 aa10.53□□□□□ -0.72
SMARCE1-213ENST00000578044 ZNF701M0R085 212 aaPredicted RBP10.52□□□□□ -0.73
SMARCE1-213ENST00000578044 MED6O75586 246 aa10.52□□□□□ -0.73
SMARCE1-213ENST00000578044 SIGLEC15Q6ZMC9 328 aa10.52□□□□□ -0.73
SMARCE1-213ENST00000578044 NEU1Q99519 415 aa10.52□□□□□ -0.73
SMARCE1-213ENST00000578044 RBKSQ9H477 322 aa10.52□□□□□ -0.73
SMARCE1-213ENST00000578044 RAB11AP62491 216 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 GAMTQ14353 236 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 TOMM5Q8N4H5 51 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 ACY3Q96HD9 319 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 TRGV9Q99603 122 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 TBC1D24Q9ULP9 559 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 V9GYH0 126 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 X6R8D5 127 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 DNAH10Q8IVF4 4471 aa10.51□□□□□ -0.73
SMARCE1-213ENST00000578044 IGKV1D-37A0A075B6S9 117 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 SNRPGP15A8MWD9 76 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 H3BMM0 161 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 RBMY1A1P0DJD3 496 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 RBMY1CP0DJD4 496 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 HLA-DRB4P13762 266 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 C4BPBP20851 252 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 S100A7P31151 101 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 NANOS2P60321 138 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 RPP30P78346 268 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 RBMY1FQ15415 496 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 ACTL10Q5JWF8 245 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 THAP8Q8NA92 274 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 OR1S1Q8NH92 325 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 SLC35E1Q96K37 410 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 HLA-DRB4X5D2U9 266 aa10.5□□□□□ -0.73
SMARCE1-213ENST00000578044 IGHV4-28A0A0C4DH34 117 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 SMIM9A6NGZ8 99 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 ZFP92A6NM28 416 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 S100A5P33763 92 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 PSMB3P49720 205 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 MEOX2P50222 304 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 GGNBP1Q5YKI7 109 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 CCDC190Q86UF4 302 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 CENPSQ8N2Z9 138 aa10.49□□□□□ -0.73
SMARCE1-213ENST00000578044 TRAV10A0A0B4J240 114 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 TMEM189A5PLL7 270 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 ISLRO14498 428 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 SFT2D2O95562 160 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 ID1P41134 155 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 ZNF79Q15937 498 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 ZNF705AQ6ZN79 300 aaPredicted RBP10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 FOXI2Q6ZQN5 318 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 OR4D5Q8NGN0 318 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 RNF126Q9BV68 326 aa10.48□□□□□ -0.73
SMARCE1-213ENST00000578044 TEX48A0A1B0GUV7 120 aa10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 ZNF705FA8MVS1 300 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 PRSS46E5RG02 174 aa10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 SOCS3O14543 225 aa10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 ZNF705DP0CH99 300 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 ZNF705BP0CI00 300 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 PAX9P55771 341 aa10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 PYDC2Q56P42 97 aa10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 GPR82Q96P67 336 aa10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 SAV1Q9H4B6 383 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 PRR13Q9NZ81 148 aa10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 APLNQ9ULZ1 77 aa10.47□□□□□ -0.73
SMARCE1-213ENST00000578044 IGKV1OR2-108A0A075B7D4 117 aa10.46□□□□□ -0.73
SMARCE1-213ENST00000578044 NAP1L6A6NFF2 107 aa10.46□□□□□ -0.73
SMARCE1-213ENST00000578044 A8MTW9 85 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms