RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 Q8NAQ8 132 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 OR1S2Q8NGQ3 325 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 TMEM170AQ8WVE7 144 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 NARS2Q96I59 477 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 SHPKQ9UHJ6 478 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 U3KQE9 123 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DNAH10Q8IVF4 4471 aa12.12□□□□□ -0.47
CDK5RAP3-206ENST00000578018 FAM240BA0A1B0GVZ2 78 aa12.11□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DUXBA0A1W2PPF3 345 aa12.11□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DEDDO75618 318 aa12.11□□□□□ -0.47
CDK5RAP3-206ENST00000578018 SLC25A4P12235 298 aa12.11□□□□□ -0.47
CDK5RAP3-206ENST00000578018 C4BPBP20851 252 aa12.11□□□□□ -0.47
CDK5RAP3-206ENST00000578018 RNASEH2CQ8TDP1 164 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-206ENST00000578018 C20orf85Q9H1P6 137 aa12.11□□□□□ -0.47
CDK5RAP3-206ENST00000578018 C9orf170A2RU37 121 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 KNCNA6PVL3 124 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 CEBPZOSA8MTT3 80 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 IFNA4P05014 189 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 OR4E1P0C645 316 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 SPP1P10451 314 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 VAMP1P23763 118 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 OR10J1P30954 320 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 YPEL3P61236 119 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 TMEM41BQ5BJD5 291 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 GLMPQ8WWB7 406 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 CACFD1Q9UGQ2 172 aa12.1□□□□□ -0.47
CDK5RAP3-206ENST00000578018 HELTA6NFD8 242 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 NXPH3O95157 252 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 HNRNPCP07910 306 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 NPY1RP25929 384 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 EIF2B2P49770 351 aaKnown RBP12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DEFA1P59665 94 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DEFA3P59666 94 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 DHRS2Q13268 280 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 USF2Q15853 346 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 NMSQ5H8A3 153 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 MORN3Q6PF18 240 aaPredicted RBP12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 C16orf54Q6UWD8 224 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 LYZL2Q7Z4W2 148 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 Q8WTZ3 238 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 PRR13Q9NZ81 148 aa12.09□□□□□ -0.47
CDK5RAP3-206ENST00000578018 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 H2AFB2P0C5Z0 115 aa12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 RBMY1A1P0DJD3 496 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 RBMY1CP0DJD4 496 aa12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 SLC25A6P12236 298 aa12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 ANXA7P20073 488 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 RBMY1FQ15415 496 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 ACTL10Q5JWF8 245 aa12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 HRH4Q9H3N8 390 aa12.08□□□□□ -0.48
CDK5RAP3-206ENST00000578018 ZNF705EA8MWA4 302 aaPredicted RBP12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 IL4P05112 153 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 SULT1A3P0DMM9 295 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 SULT1A4P0DMN0 295 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 MIFP14174 115 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 PSMG4Q5JS54 123 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 ETFRF1Q6IPR1 90 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 C2CD4CQ8TF44 421 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 NUDT15Q9NV35 164 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 TMED3Q9Y3Q3 217 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 HECTD4Q9Y4D8 3996 aa12.07□□□□□ -0.48
CDK5RAP3-206ENST00000578018 TRAV6A0A075B6T7 132 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 TOMM40O96008 361 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 AP2S1P53680 142 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 TCTAP57738 103 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 C4orf46Q504U0 113 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 NRARPQ7Z6K4 114 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 NOXA1Q86UR1 476 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 COQ8AQ8NI60 647 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 ENKURQ8TC29 256 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 MITD1Q8WV92 249 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 ACY3Q96HD9 319 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 HSPB7Q9UBY9 170 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 X6R8D5 127 aa12.06□□□□□ -0.48
CDK5RAP3-206ENST00000578018 C11orf94C9JXX5 98 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 FAM90A26D6RGX4 464 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 BUB3O43684 328 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 PITX3O75364 302 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 IL5P05113 134 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 PRR20EP86478 221 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 PRR20CP86479 221 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 PRR20DP86480 221 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 PRR20BP86481 221 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 PRR20AP86496 221 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 SMCO1Q147U7 214 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 CSNK1G2-AS1Q8NCQ2 148 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 RAB40CQ96S21 281 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 MARVELD1Q9BSK0 173 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 CLEC5AQ9NY25 188 aa12.05□□□□□ -0.48
CDK5RAP3-206ENST00000578018 IFNA10P01566 189 aa12.04□□□□□ -0.48
CDK5RAP3-206ENST00000578018 RD3LP0DJH9 198 aa12.04□□□□□ -0.48
CDK5RAP3-206ENST00000578018 SIGLEC15Q6ZMC9 328 aa12.04□□□□□ -0.48
CDK5RAP3-206ENST00000578018 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
CDK5RAP3-206ENST00000578018 NRN1Q9NPD7 142 aa12.04□□□□□ -0.48
CDK5RAP3-206ENST00000578018 APLNQ9ULZ1 77 aa12.04□□□□□ -0.48
CDK5RAP3-206ENST00000578018 U3KQ87 197 aa12.04□□□□□ -0.48
CDK5RAP3-206ENST00000578018 ELOA3CA0A087WX78 387 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-206ENST00000578018 PSG1P11464 419 aa12.03□□□□□ -0.48
CDK5RAP3-206ENST00000578018 HLA-DMBP28068 263 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms