RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 PSG1P11464 419 aa10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 FAUP35544 74 aaKnown RBP10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 TCTAP57738 103 aa10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 SUPT4H1P63272 117 aaKnown RBP10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 SRPXP78539 464 aa10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 KLF9Q13886 244 aaPredicted RBP10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 RBMY1FQ15415 496 aaKnown RBP10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 OR51G1Q8NGK1 321 aa10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 OR1S1Q8NH92 325 aa10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 HRH4Q9H3N8 390 aa10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 NRN1Q9NPD7 142 aa10.84□□□□□ -0.67
RN7SL560P-201ENST00000577943 ZFP92A6NM28 416 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 ZNF705EA8MWA4 302 aaPredicted RBP10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 H3BMQ9 156 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 CENPSQ8N2Z9 138 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 MCFD2Q8NI22 146 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 RNF125Q96EQ8 232 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 SOSTQ9BQB4 213 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 PBDC1Q9BVG4 233 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 TBC1D24Q9ULP9 559 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 X6R8D5 127 aa10.83□□□□□ -0.68
RN7SL560P-201ENST00000577943 PIGBOS1A0A0B4J2F0 54 aa10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 HLA-DMBP28068 263 aa10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 NUP62P37198 522 aaPredicted RBP10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 GAMTQ14353 236 aa10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 TMED4Q7Z7H5 227 aa10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 CSNK1G2-AS1Q8NCQ2 148 aa10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 SLC35E1Q96K37 410 aa10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 SEPSECSQ9HD40 501 aaKnown RBP10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 PFDN2Q9UHV9 154 aa10.82□□□□□ -0.68
RN7SL560P-201ENST00000577943 ELOA3CA0A087WX78 387 aaPredicted RBP10.81□□□□□ -0.68
RN7SL560P-201ENST00000577943 GPX4P36969 197 aaPredicted RBP10.81□□□□□ -0.68
RN7SL560P-201ENST00000577943 ATP5IP56385 69 aaPredicted RBP10.81□□□□□ -0.68
RN7SL560P-201ENST00000577943 AP3S2P59780 193 aa10.81□□□□□ -0.68
RN7SL560P-201ENST00000577943 PYDC2Q56P42 97 aa10.81□□□□□ -0.68
RN7SL560P-201ENST00000577943 TOMM5Q8N4H5 51 aa10.81□□□□□ -0.68
RN7SL560P-201ENST00000577943 XCL2Q9UBD3 114 aa10.81□□□□□ -0.68
RN7SL560P-201ENST00000577943 VPS13DQ5THJ4 4388 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 TRAV10A0A0B4J240 114 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 DUXBA0A1W2PPF3 345 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 H3BMM0 161 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 FABP1P07148 127 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 IAPPP10997 89 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 LYZP61626 148 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 RAB11AP62491 216 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 ZNF90Q03938 601 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 TMEM128Q5BJH2 165 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 OR8G2PQ6IF36 304 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 Q6ZTC4 211 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 PAIP2BQ9ULR5 123 aaKnown RBP10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 APLNQ9ULZ1 77 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 DNAH6Q9C0G6 4158 aa10.8□□□□□ -0.68
RN7SL560P-201ENST00000577943 IGKV1D-37A0A075B6S9 117 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 SNRPGP15A8MWD9 76 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 VAMP1P23763 118 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 NKX2-1P43699 371 aaPredicted RBP10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 PRR20EP86478 221 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 PRR20CP86479 221 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 PRR20DP86480 221 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 PRR20BP86481 221 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 PRR20AP86496 221 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 PPP1R14BQ96C90 147 aa10.79□□□□□ -0.68
RN7SL560P-201ENST00000577943 PITX3O75364 302 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 MED6O75586 246 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 HLA-DRB4P13762 266 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 ID1P41134 155 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 OR2F1Q13607 317 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 TRIM63Q969Q1 353 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 LINC00052Q96N35 136 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 CELA1Q9UNI1 258 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 HLA-DRB4X5D2U9 266 aa10.78□□□□□ -0.68
RN7SL560P-201ENST00000577943 IGHV4-4A0A075B6R2 117 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 IGKV3-20P01619 116 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 SLC25A6P12236 298 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 S100A5P33763 92 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 C1orf194Q5T5A4 169 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 LRTM2Q8N967 370 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 COQ8AQ8NI60 647 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 TRGV9Q99603 122 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 SLC25A21Q9BQT8 299 aaPredicted RBP10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 WDR12Q9GZL7 423 aaKnown RBP10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 DNAH10Q8IVF4 4471 aa10.77□□□□□ -0.69
RN7SL560P-201ENST00000577943 CCDC160A6NGH7 325 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 SFT2D2O95562 160 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 FXYD7P58549 80 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 DEFB1P60022 68 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 RPP30P78346 268 aaKnown RBP10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 GDF5OSQ5U4N7 250 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 ZNF767PQ75MW2 155 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 OR8I2Q8N0Y5 310 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 CIB3Q96Q77 187 aaPredicted RBP10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 TMED3Q9Y3Q3 217 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 V9GYH0 126 aa10.76□□□□□ -0.69
RN7SL560P-201ENST00000577943 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
RN7SL560P-201ENST00000577943 WRBO00258 174 aa10.75□□□□□ -0.69
RN7SL560P-201ENST00000577943 SYNGR2O43760 224 aa10.75□□□□□ -0.69
RN7SL560P-201ENST00000577943 HOXB5P09067 269 aa10.75□□□□□ -0.69
RN7SL560P-201ENST00000577943 PSMB3P49720 205 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms