RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 DEFA3P59666 94 aa11.92□□□□□ -0.5
VAPA-204ENST00000577901 PAFAH1B2P68402 229 aa11.92□□□□□ -0.5
VAPA-204ENST00000577901 GAMTQ14353 236 aa11.92□□□□□ -0.5
VAPA-204ENST00000577901 C12orf45Q8N5I9 185 aaPredicted RBP11.92□□□□□ -0.5
VAPA-204ENST00000577901 ZBTB8BQ8NAP8 495 aaPredicted RBP11.92□□□□□ -0.5
VAPA-204ENST00000577901 VSIRQ9H7M9 311 aa11.92□□□□□ -0.5
VAPA-204ENST00000577901 PSENENQ9NZ42 101 aa11.92□□□□□ -0.5
VAPA-204ENST00000577901 FRAS1Q86XX4 4008 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 ZFP92A6NM28 416 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 SSSCA1O60232 199 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 SCGB1D2O95969 90 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 TOMM40O96008 361 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 APOHP02749 345 aaPredicted RBP11.91□□□□□ -0.5
VAPA-204ENST00000577901 FABP1P07148 127 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 CMC4P56277 68 aaPredicted RBP11.91□□□□□ -0.5
VAPA-204ENST00000577901 IFITM3Q01628 133 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 TCF24Q7RTU0 167 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 ST8SIA2Q92186 375 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 SMIM8Q96KF7 97 aa11.91□□□□□ -0.5
VAPA-204ENST00000577901 IGHV3-66A0A0C4DH42 116 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 C5orf51A6NDU8 294 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 FAM25EA8MYX2 175 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 H3BP45 60 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 IL5P05113 134 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 CRYBB3P26998 211 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 RPL11P62913 178 aaKnown RBP11.9□□□□□ -0.5
VAPA-204ENST00000577901 FAM90A2PQ658T7 463 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 LINC00476Q8WZB0 136 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 GRAMD2BQ96HH9 432 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 RAB40CQ96S21 281 aa11.9□□□□□ -0.5
VAPA-204ENST00000577901 GPN1Q9HCN4 374 aaPredicted RBP11.9□□□□□ -0.5
VAPA-204ENST00000577901 IGKV3-7A0A075B6H7 116 aa11.89□□□□□ -0.51
VAPA-204ENST00000577901 IL4P05112 153 aa11.89□□□□□ -0.51
VAPA-204ENST00000577901 PSG1P11464 419 aa11.89□□□□□ -0.51
VAPA-204ENST00000577901 NRARPQ7Z6K4 114 aa11.89□□□□□ -0.51
VAPA-204ENST00000577901 OR51G1Q8NGK1 321 aa11.89□□□□□ -0.51
VAPA-204ENST00000577901 GGTLC1Q9BX51 225 aa11.89□□□□□ -0.51
VAPA-204ENST00000577901 CCSO14618 274 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 DFFBO76075 338 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 HNRNPCP07910 306 aaKnown RBP eCLIP11.88□□□□□ -0.512e-7■□□□□ 11
VAPA-204ENST00000577901 TFPI2P48307 235 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 TAS2R30P59541 319 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 GBGT1Q8N5D6 347 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 C2orf50Q96LR7 162 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 OVOL2Q9BRP0 275 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 UBQLN2Q9UHD9 624 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 PFDN2Q9UHV9 154 aa11.88□□□□□ -0.51
VAPA-204ENST00000577901 LOC102724200A0A096LPH7 203 aaPredicted RBP11.87□□□□□ -0.51
VAPA-204ENST00000577901 SNRPGP15A8MWD9 76 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 L7N2F9 121 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 DNASE2O00115 360 aaPredicted RBP11.87□□□□□ -0.51
VAPA-204ENST00000577901 PRAF2O60831 178 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 LY6G6CO95867 125 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 P2RY1P47900 373 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 EIF2B2P49770 351 aaKnown RBP11.87□□□□□ -0.51
VAPA-204ENST00000577901 VAMP2P63027 116 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 ZNF90Q03938 601 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 GSG1LQ6UXU4 331 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 LILRB2Q8N423 598 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 TRGV9Q99603 122 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 RABAC1Q9UI14 185 aa11.87□□□□□ -0.51
VAPA-204ENST00000577901 IGKV1D-37A0A075B6S9 117 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 CXorf65A6NEN9 183 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 PRSS46E5RG02 174 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 INMT-MINDY4F8WBC2 141 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 TSC22D2O75157 780 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 CFDP00746 253 aaPredicted RBP11.86□□□□□ -0.51
VAPA-204ENST00000577901 MBPP02686 304 aaPredicted RBP11.86□□□□□ -0.51
VAPA-204ENST00000577901 AP2S1P53680 142 aaPredicted RBP11.86□□□□□ -0.51
VAPA-204ENST00000577901 PAX9P55771 341 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 AKR1C1Q04828 323 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 USF2Q15853 346 aaPredicted RBP11.86□□□□□ -0.51
VAPA-204ENST00000577901 OR8G2PQ6IF36 304 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 WFDC3Q8IUB2 231 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 THAP8Q8NA92 274 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 RNF125Q96EQ8 232 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 MS4A6AQ9H2W1 248 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 U3KQE9 123 aa11.86□□□□□ -0.51
VAPA-204ENST00000577901 TRAV2A0A0B4J234 112 aa11.85□□□□□ -0.51
VAPA-204ENST00000577901 HELTA6NFD8 242 aa11.85□□□□□ -0.51
VAPA-204ENST00000577901 NUP62P37198 522 aaPredicted RBP11.85□□□□□ -0.51
VAPA-204ENST00000577901 TMEM14EPQ6UXP3 125 aa11.85□□□□□ -0.51
VAPA-204ENST00000577901 OR10P1Q8NGE3 313 aa11.85□□□□□ -0.51
VAPA-204ENST00000577901 MARVELD1Q9BSK0 173 aa11.85□□□□□ -0.51
VAPA-204ENST00000577901 PBDC1Q9BVG4 233 aa11.85□□□□□ -0.51
VAPA-204ENST00000577901 RCL1Q9Y2P8 373 aaKnown RBP11.85□□□□□ -0.51
VAPA-204ENST00000577901 KMT2AQ03164 3969 aa11.85□□□□□ -0.51
VAPA-204ENST00000577901 SMCO3A2RU48 225 aa11.84□□□□□ -0.51
VAPA-204ENST00000577901 C7orf66A4D0T2 115 aa11.84□□□□□ -0.51
VAPA-204ENST00000577901 METTL15P1P0C7V9 234 aa11.84□□□□□ -0.51
VAPA-204ENST00000577901 PVALBP20472 110 aaPredicted RBP11.84□□□□□ -0.51
VAPA-204ENST00000577901 OR2F1Q13607 317 aa11.84□□□□□ -0.51
VAPA-204ENST00000577901 ODF3L2Q3SX64 289 aa11.84□□□□□ -0.51
VAPA-204ENST00000577901 C16orf54Q6UWD8 224 aa11.84□□□□□ -0.51
VAPA-204ENST00000577901 ACOT7LQ6ZUV0 252 aa11.84□□□□□ -0.51
VAPA-204ENST00000577901 TMEM144Q7Z5S9 345 aa11.84□□□□□ -0.51
VAPA-204ENST00000577901 LSM5Q9Y4Y9 91 aaKnown RBP11.84□□□□□ -0.51
VAPA-204ENST00000577901 IGKV1OR2-108A0A075B7D4 117 aa11.83□□□□□ -0.52
VAPA-204ENST00000577901 A0A0J9YWU9 116 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms