RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 TRBV12-3P01733 135 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 PSG1P11464 419 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 RPEL1Q2QD12 228 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 KRTAP24-1Q3LI83 254 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 AWAT1Q58HT5 328 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 TEX261Q6UWH6 196 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 OR1B1Q8NGR6 318 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 WFDC12Q8WWY7 111 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 TMEM158Q8WZ71 300 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 C19orf24Q9BVV8 132 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 RFNGQ9Y644 331 aa12.74□□□□□ -0.37
ERCC4-208ENST00000576348 UMAD1C9J7I0 102 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 OR2C1O95371 312 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 HSPB1P04792 205 aaKnown RBP12.73□□□□□ -0.37
ERCC4-208ENST00000576348 IL4P05112 153 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 OR5G3P0C626 314 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 ORM2P19652 201 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 ADMP35318 185 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 TMEM41BQ5BJD5 291 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 PXDC1Q5TGL8 231 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 S100A7AQ86SG5 101 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 OR1L4Q8NGR5 311 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 DOK5Q9P104 306 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 UBQLN2Q9UHD9 624 aa12.73□□□□□ -0.37
ERCC4-208ENST00000576348 PUS1Q9Y606 427 aaKnown RBP eCLIP12.73□□□□□ -0.37
ERCC4-208ENST00000576348 BMPR1BO00238 502 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 HYPMO75409 117 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 ZP3P21754 424 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 S100A7P31151 101 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 RAB5CP51148 216 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 PRR20EP86478 221 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 PRR20CP86479 221 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 PRR20DP86480 221 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 PRR20BP86481 221 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 PRR20AP86496 221 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 NSUN5P1Q3KNT7 163 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 FAM106AQ4KMX7 169 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 ZNF680Q8NEM1 530 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 OR10G4Q8NGN3 311 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 OR10G9Q8NGN4 311 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 OR10G7Q8NGN6 311 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 OR1N2Q8NGR9 330 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 PFDN5Q99471 154 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 C20orf24Q9BUV8 137 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
ERCC4-208ENST00000576348 NF1P21359 2839 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 IGHV4OR15-8A0A075B7B6 117 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 A0A087WW49 117 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 A0A1W2PPV4 95 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 ZNF320A2RRD8 509 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 LINC01619G3V211 115 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 NDUFA4O00483 81 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 M6PRP20645 277 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 RAB2AP61019 212 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 FAM74A1Q5RGS3 127 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 C10orf113Q5VZT2 155 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 HIST2H2BDQ6DRA6 164 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 C18orf65Q6ZTR6 163 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 C8orf86Q6ZUL3 223 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 RNF125Q96EQ8 232 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 HIGD1AQ9Y241 93 aa12.71□□□□□ -0.37
ERCC4-208ENST00000576348 ELOA3CA0A087WX78 387 aaPredicted RBP12.7□□□□□ -0.38
ERCC4-208ENST00000576348 I3L521 148 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 DEFB136Q30KP8 78 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 FAM122CQ6P4D5 195 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 TOMM20LQ6UXN7 152 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 ZNF767PQ75MW2 155 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 NDUFA11Q86Y39 141 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 OR11H1Q8NG94 326 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 FAM213BQ8TBF2 198 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 RNF141Q8WVD5 230 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 NARS2Q96I59 477 aaKnown RBP12.7□□□□□ -0.38
ERCC4-208ENST00000576348 RNF2Q99496 336 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 ACTR3CQ9C0K3 210 aaPredicted RBP12.7□□□□□ -0.38
ERCC4-208ENST00000576348 DNAJC4Q9NNZ3 241 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 PFDN2Q9UHV9 154 aa12.7□□□□□ -0.38
ERCC4-208ENST00000576348 IGHV3OR16-8A0A075B7F1 116 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 HOXD3P31249 432 aaPredicted RBP12.69□□□□□ -0.38
ERCC4-208ENST00000576348 SULT1A2P50226 295 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 RAB14P61106 215 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 RHOBP62745 196 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 GCSAMLQ5JQS6 135 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 DPPA3Q6W0C5 159 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 C12orf54Q6X4T0 127 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 GATAD1Q8WUU5 269 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 METTL26Q96S19 204 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 RABAC1Q9UI14 185 aa12.69□□□□□ -0.38
ERCC4-208ENST00000576348 WI2-2373I1.2A0A1W2PRP0 233 aa12.68□□□□□ -0.38
ERCC4-208ENST00000576348 ZNF705EA8MWA4 302 aaPredicted RBP12.68□□□□□ -0.38
ERCC4-208ENST00000576348 KRTAP10-3P60369 221 aa12.68□□□□□ -0.38
ERCC4-208ENST00000576348 VSIRQ9H7M9 311 aa12.68□□□□□ -0.38
ERCC4-208ENST00000576348 RPRMQ9NS64 109 aa12.68□□□□□ -0.38
ERCC4-208ENST00000576348 UFC1Q9Y3C8 167 aa12.68□□□□□ -0.38
ERCC4-208ENST00000576348 SETD2Q9BYW2 2564 aaPredicted RBP12.67□□□□□ -0.38
ERCC4-208ENST00000576348 CCL24O00175 119 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
ERCC4-208ENST00000576348 PLP1P60201 277 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 FAM78BQ5VT40 261 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 GPHB5Q86YW7 130 aa12.67□□□□□ -0.38
ERCC4-208ENST00000576348 C1QL4Q86Z23 238 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 251.6 ms