RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 C1orf158Q8N1D5 194 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 SLC24A4Q8NFF2 622 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 NRG4Q8WWG1 115 aa6.33□□□□□ -1.4
SMG6-218ENST00000575454 HEYLQ9NQ87 328 aaPredicted RBP6.33□□□□□ -1.4
SMG6-218ENST00000575454 C3orf85A0A1B0GTC6 90 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 SMIM31A0A1B0GVY4 71 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 F5H768 121 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 M0QYG6 137 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 ISLRO14498 428 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 INAFM2P0DMQ5 153 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 PGAM2P15259 253 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 RORCP51449 518 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 PAX9P55771 341 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 TRIM16LQ309B1 348 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 AARDQ4LEZ3 155 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 C2orf83Q53S99 150 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 FAM219AQ8IW50 185 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 SAMD12Q8N8I0 201 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 OR51G1Q8NGK1 321 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 RNASE11Q8TAA1 199 aaKnown RBP6.32□□□□□ -1.4
SMG6-218ENST00000575454 IGF2BP2-AS1Q96M15 143 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 ABHD1Q96SE0 405 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 SLC35B3Q9H1N7 401 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.32□□□□□ -1.4
SMG6-218ENST00000575454 PTTG2Q9NZH5 202 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 FAT1Q14517 4588 aa6.32□□□□□ -1.4
SMG6-218ENST00000575454 ATP5G1P05496 136 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 FABP1P07148 127 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 DEFB130BP0DP73 79 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 DEFB130AP0DP74 79 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 PSG1P11464 419 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 TSPOP30536 169 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 ATP5G3P48201 142 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 MEOX2P50222 304 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 PIGPP57054 158 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 FAM78BQ5VT40 261 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 OR4C16Q8NGL9 310 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 GPX8Q8TED1 209 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 RNF125Q96EQ8 232 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 TP53RKQ96S44 253 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 Q9H8V8 135 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 RPRMQ9NS64 109 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 COPZ2Q9P299 210 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 LINC00588Q9Y4M8 146 aa6.31□□□□□ -1.4
SMG6-218ENST00000575454 A0A0J9YX75 114 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 A0A1W2PPQ1 181 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 CBY3A6NI87 242 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 SUPT4H1P63272 117 aaKnown RBP6.3□□□□□ -1.4
SMG6-218ENST00000575454 IZUMO2Q6UXV1 221 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 SSX7Q7RTT5 188 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 CCDC71LQ8N9Z2 235 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 ZFAND1Q8TCF1 268 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 ACY3Q96HD9 319 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 PBDC1Q9BVG4 233 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 WDR12Q9GZL7 423 aaKnown RBP6.3□□□□□ -1.4
SMG6-218ENST00000575454 PGPEP1Q9NXJ5 209 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 DOK5Q9P104 306 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 RAB26Q9ULW5 256 aa6.3□□□□□ -1.4
SMG6-218ENST00000575454 CEBPZOSA8MTT3 80 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 SOCS3O14543 225 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 INSP01308 110 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 UCP1P25874 307 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 ATP5IP56385 69 aaPredicted RBP6.29□□□□□ -1.4
SMG6-218ENST00000575454 DEFB1P60022 68 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 KLF9Q13886 244 aaPredicted RBP6.29□□□□□ -1.4
SMG6-218ENST00000575454 GPR141Q7Z602 305 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 OR8I2Q8N0Y5 310 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 ARRDC1Q8N5I2 433 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 PPP1R14BQ96C90 147 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 ZNF503Q96F45 646 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 Q9H3A6 140 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 U3KQ87 197 aa6.29□□□□□ -1.4
SMG6-218ENST00000575454 ZFP92A6NM28 416 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 A8MTW9 85 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 SNRPGP15A8MWD9 76 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 EREGO14944 169 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 DUSP14O95147 198 aaKnown RBP6.28□□□□□ -1.4
SMG6-218ENST00000575454 CDS2O95674 445 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 PI3P19957 117 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 TBPP20226 339 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 S100A7P31151 101 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 GALR1P47211 349 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 KRTAP10-2P60368 255 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 SP6Q3SY56 376 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 RNASE10Q5GAN6 216 aaKnown RBP6.28□□□□□ -1.4
SMG6-218ENST00000575454 RNF141Q8WVD5 230 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 FRZBQ92765 325 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 GPR146Q96CH1 333 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 C16orf92Q96LL3 132 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 AGRNO00468 2067 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 HMCN2Q8NDA2 5059 aa6.28□□□□□ -1.4
SMG6-218ENST00000575454 ZNF705GA8MUZ8 300 aaPredicted RBP6.27□□□□□ -1.41
SMG6-218ENST00000575454 F6UB75 175 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 GABARAPH6UMI1 98 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 ADAP1O75689 374 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 NXPH3O95157 252 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 GABARAPO95166 117 aa6.27□□□□□ -1.41
SMG6-218ENST00000575454 CFDP00746 253 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms