RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SIGLEC8Q9NYZ4 499 aa13.02□□□□□ -0.33
NUP88-210ENST00000574867 TMEM213A2RRL7 107 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 SEC14L6B5MCN3 397 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 IL4P05112 153 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 BTNL8Q6UX41 500 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 BPIFCQ8NFQ6 507 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 SMIM3Q9BZL3 60 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 FBXL17Q9UF56 701 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 C2orf70A6NJV1 201 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 AGPAT2O15120 278 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 FGF7P21781 194 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 INSL3P51460 131 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 ZNF345Q14585 488 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 C9orf66Q5T8R8 295 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 RNF125Q96EQ8 232 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 MGST2Q99735 147 aa13.01□□□□□ -0.33
NUP88-210ENST00000574867 C1QBP02746 253 aa13□□□□□ -0.33
NUP88-210ENST00000574867 CAMLGP49069 296 aa13□□□□□ -0.33
NUP88-210ENST00000574867 OR2F1Q13607 317 aa13□□□□□ -0.33
NUP88-210ENST00000574867 ZNF266Q14584 549 aa13□□□□□ -0.33
NUP88-210ENST00000574867 TM4SF20Q53R12 229 aa13□□□□□ -0.33
NUP88-210ENST00000574867 IL34Q6ZMJ4 242 aa13□□□□□ -0.33
NUP88-210ENST00000574867 OR11H4Q8NGC9 324 aa13□□□□□ -0.33
NUP88-210ENST00000574867 PARD6GQ9BYG4 376 aaPredicted RBP13□□□□□ -0.33
NUP88-210ENST00000574867 MFFQ9GZY8 342 aa13□□□□□ -0.33
NUP88-210ENST00000574867 IGHV3OR16-8A0A075B7F1 116 aa13□□□□□ -0.33
NUP88-210ENST00000574867 SAP30O75446 220 aa13□□□□□ -0.33
NUP88-210ENST00000574867 IFNA5P01569 189 aa13□□□□□ -0.33
NUP88-210ENST00000574867 CSN3P07498 182 aa13□□□□□ -0.33
NUP88-210ENST00000574867 AP2S1P53680 142 aaPredicted RBP13□□□□□ -0.33
NUP88-210ENST00000574867 METTL26Q96S19 204 aa13□□□□□ -0.33
NUP88-210ENST00000574867 WDR61Q9GZS3 305 aaKnown RBP13□□□□□ -0.33
NUP88-210ENST00000574867 MRPL27Q9P0M9 148 aaKnown RBP13□□□□□ -0.33
NUP88-210ENST00000574867 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
NUP88-210ENST00000574867 IGLL1P15814 213 aa12.99□□□□□ -0.33
NUP88-210ENST00000574867 GGTLC1Q9BX51 225 aa12.99□□□□□ -0.33
NUP88-210ENST00000574867 KCNIP2Q9NS61 270 aa12.99□□□□□ -0.33
NUP88-210ENST00000574867 C8orf88P0DMB2 117 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 FOLR2P14207 255 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 CBLN1P23435 193 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 BMI1P35226 326 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 LYZP61626 148 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 NPCDR1Q9BY65 106 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 SLC45A2Q9UMX9 530 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 IGHV7-4-1A0A0J9YVY3 117 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 WIPF1O43516 503 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 LINC00869P0C866 280 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 NPPCP23582 126 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 OPCMLQ14982 345 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 USF2Q15853 346 aaPredicted RBP12.98□□□□□ -0.33
NUP88-210ENST00000574867 SCGB1C1Q8TD33 95 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 NARS2Q96I59 477 aaKnown RBP12.98□□□□□ -0.33
NUP88-210ENST00000574867 HYLS1Q96M11 299 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 PBDC1Q9BVG4 233 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 WFDC1Q9HC57 220 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 PFDN2Q9UHV9 154 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 RABAC1Q9UI14 185 aa12.98□□□□□ -0.33
NUP88-210ENST00000574867 TAAR5O14804 337 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 ZNF207O43670 478 aaKnown RBP12.97□□□□□ -0.33
NUP88-210ENST00000574867 GATA2P23769 480 aaPredicted RBP12.97□□□□□ -0.33
NUP88-210ENST00000574867 CRYBB3P26998 211 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 RPL29P47914 159 aaKnown RBP12.97□□□□□ -0.33
NUP88-210ENST00000574867 PXDC1Q5TGL8 231 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 TMEM182Q6ZP80 229 aaPredicted RBP12.97□□□□□ -0.33
NUP88-210ENST00000574867 NEURL2Q9BR09 285 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 A0A0D9SG52 128 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 C17orf112F2Z3M2 114 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 HNRNPCP07910 306 aaKnown RBP eCLIP12.97□□□□□ -0.33
NUP88-210ENST00000574867 EIF2B2P49770 351 aaKnown RBP12.97□□□□□ -0.33
NUP88-210ENST00000574867 PLP1P60201 277 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 KCNRGQ8N5I3 272 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 ZNF709Q8N972 641 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 DYNLRB2Q8TF09 96 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 TECRQ9NZ01 308 aaKnown RBP12.97□□□□□ -0.33
NUP88-210ENST00000574867 SMPXQ9UHP9 88 aa12.97□□□□□ -0.33
NUP88-210ENST00000574867 A0A1W2PS18 150 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 S100A7P31151 101 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 PRR20EP86478 221 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 PRR20CP86479 221 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 PRR20DP86480 221 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 PRR20BP86481 221 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 PRR20AP86496 221 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 ZFP69Q49AA0 526 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 ADAMTSL5Q6ZMM2 481 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 STPG3Q8N7X2 389 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 TMEM231Q9H6L2 316 aa12.96□□□□□ -0.33
NUP88-210ENST00000574867 BORCS7-ASMTA0A0B4J1R7 106 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 IGLV1-51P01701 117 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 EDN2P20800 178 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 CD300CQ08708 224 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 S100A7AQ86SG5 101 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 PKD1L1Q8TDX9 2849 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 B2MP61769 119 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 Q6ZRG5 221 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 OR2K2Q8NGT1 345 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 RHPN1-AS1Q9BWJ2 59 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 VSIRQ9H7M9 311 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 PXMP4Q9Y6I8 212 aa12.95□□□□□ -0.34
NUP88-210ENST00000574867 ORM2P19652 201 aa12.94□□□□□ -0.34
NUP88-210ENST00000574867 SAMD5Q5TGI4 173 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms