RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ITLN1Q8WWA0 313 aa11.63□□□□□ -0.55
SMG6-215ENST00000574501 NPIPB3Q92617 1050 aa11.63□□□□□ -0.55
SMG6-215ENST00000574501 DAZAP1Q96EP5 407 aaKnown RBP11.63□□□□□ -0.55
SMG6-215ENST00000574501 ZNF747Q9BV97 191 aa11.63□□□□□ -0.55
SMG6-215ENST00000574501 MLST8Q9BVC4 326 aa11.63□□□□□ -0.55
SMG6-215ENST00000574501 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.62□□□□□ -0.55
SMG6-215ENST00000574501 ACP1P24666 158 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 PLP1P60201 277 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 ABHD17BQ5VST6 288 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 Q71RC1 249 aaPredicted RBP11.62□□□□□ -0.55
SMG6-215ENST00000574501 OR8A1Q8NGG7 326 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 ZNF714Q96N38 554 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 JKAMPQ9P055 326 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 BDP1A6H8Y1 2624 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 E7EUB6 86 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 FAM87AP0C7U9 286 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 FAM106CPP0CH98 169 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 MYCNOSP40205 109 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 MEF2CQ06413 473 aaPredicted RBP11.62□□□□□ -0.55
SMG6-215ENST00000574501 C17orf58Q2M2W7 97 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 FAM106AQ4KMX7 169 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 PRSS57Q6UWY2 283 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 OR2Z1Q8NG97 314 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 OR1L8Q8NGR8 309 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 RND1Q92730 232 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 PERPQ96FX8 193 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 NPFFR1Q9GZQ6 430 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 THYN1Q9P016 225 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 SPCS1Q9Y6A9 102 aa11.62□□□□□ -0.55
SMG6-215ENST00000574501 C19orf71A6NCJ1 209 aa11.61□□□□□ -0.55
SMG6-215ENST00000574501 FSTL3O95633 263 aa11.61□□□□□ -0.55
SMG6-215ENST00000574501 ORM2P19652 201 aa11.61□□□□□ -0.55
SMG6-215ENST00000574501 LOC400499M0QZD8 3231 aa11.61□□□□□ -0.55
SMG6-215ENST00000574501 SAA1P0DJI8 122 aaPredicted RBP11.61□□□□□ -0.55
SMG6-215ENST00000574501 PPIAL4GP0DN37 164 aa11.61□□□□□ -0.55
SMG6-215ENST00000574501 PRB4P10163 310 aaPredicted RBP11.61□□□□□ -0.55
SMG6-215ENST00000574501 RPL24P83731 157 aaKnown RBP11.61□□□□□ -0.55
SMG6-215ENST00000574501 FAM201AQ5SY85 155 aa11.61□□□□□ -0.55
SMG6-215ENST00000574501 RBMXL3Q8N7X1 1067 aaKnown RBP11.61□□□□□ -0.55
SMG6-215ENST00000574501 OR1L4Q8NGR5 311 aa11.61□□□□□ -0.55
SMG6-215ENST00000574501 NAV3Q8IVL0 2385 aa11.61□□□□□ -0.55
SMG6-215ENST00000574501 TRAV8-1A0A0A6YYK1 113 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 SPRNQ5BIV9 151 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 DUX4L9Q6RFH8 374 aaPredicted RBP11.6□□□□□ -0.55
SMG6-215ENST00000574501 PIP4P2Q8N4L2 257 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 VSTM2AQ8TAG5 236 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 ADTRPQ96IZ2 230 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 GTSF1LQ9H1H1 148 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 MRPL36Q9P0J6 103 aaKnown RBP11.6□□□□□ -0.55
SMG6-215ENST00000574501 SOX21Q9Y651 276 aaPredicted RBP11.6□□□□□ -0.55
SMG6-215ENST00000574501 DLL1O00548 723 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 CFIP05156 583 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 CT45A6P0DMU7 189 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 CT45A5P0DMU8 189 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 CT45A7P0DMV0 189 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 FXYD7P58549 80 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 NHLH1Q02575 133 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 CR1LQ2VPA4 569 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 TM4SF20Q53R12 229 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 CIARTQ8N365 385 aaPredicted RBP11.6□□□□□ -0.55
SMG6-215ENST00000574501 KLF12Q9Y4X4 402 aa11.6□□□□□ -0.55
SMG6-215ENST00000574501 A0A1W2PPM0 123 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 NTN3O00634 580 aaPredicted RBP11.59□□□□□ -0.55
SMG6-215ENST00000574501 COL8A1P27658 744 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 MEOX1P50221 254 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 LOXL1Q08397 574 aaPredicted RBP11.59□□□□□ -0.55
SMG6-215ENST00000574501 POU2AF1Q16633 256 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 PRSS3P2Q8NHM4 247 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 TNFRSF14Q92956 283 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 CLUHP3Q96NS8 147 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 IGKV1D-37A0A075B6S9 117 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 LTAP01374 205 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 CT83Q5H943 113 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 FA2HQ7L5A8 372 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 UBALD2Q8IYN6 164 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 PPP1R35Q8TAP8 253 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 CACNG8Q8WXS5 425 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 ASCL2Q99929 193 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 MRPS17Q9Y2R5 130 aaKnown RBP11.59□□□□□ -0.55
SMG6-215ENST00000574501 HEATR1Q9H583 2144 aaKnown RBP11.59□□□□□ -0.55
SMG6-215ENST00000574501 MED13Q9UHV7 2174 aa11.59□□□□□ -0.55
SMG6-215ENST00000574501 LOC389332A0A1B0GUA5 103 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 TCRBV4S1A1TA0A5B7 111 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 A1L4Q6 167 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 SRRM5B3KS81 715 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 AZU1P20160 251 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 ERHP84090 104 aaKnown RBP11.58□□□□□ -0.56
SMG6-215ENST00000574501 RUSC1-AS1Q66K80 236 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 GCSAMQ8N6F7 178 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 F11RQ9Y624 299 aaKnown RBP11.58□□□□□ -0.56
SMG6-215ENST00000574501 PPIAL4CA0A0B4J2A2 164 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 TEX48A0A1B0GUV7 120 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 K7ESF4 209 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 HAX1O00165 279 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 CGB3P0DN86 165 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 CGB7P0DN87 165 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 CSN1S1P47710 185 aa11.58□□□□□ -0.56
SMG6-215ENST00000574501 SMAGPQ0VAQ4 97 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 141.1 ms