RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 DNMBPQ6XZF7 1577 aa3.51□□□□□ -1.85
TOPBP1-210ENST00000572787 NLRC5Q86WI3 1866 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 CEP164Q9UPV0 1460 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 WNK3Q9BYP7 1800 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 TCRBV3S1A0A5B6 114 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 GEMIN2O14893 280 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 HRASP01112 189 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 OR5AC1P0C628 307 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 IGHV3-30-3P0DP02 117 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 Q1RN00 199 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 Q56UQ5 140 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 EIF5AL1Q6IS14 154 aaKnown RBP3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 C7orf65Q6ZTY9 151 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 MIR17HGQ75NE6 70 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 SLC35E3Q7Z769 313 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 KLHL30-AS1Q8NEE0 82 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 LINC01006Q8NI28 216 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 CHCHD2Q9Y6H1 151 aaPredicted RBP3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 TRIP11Q15643 1979 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 DENND4CQ5VZ89 1909 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 ANKRD31Q8N7Z5 1873 aa3.5□□□□□ -1.85
TOPBP1-210ENST00000572787 PCM1Q15154 2024 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 PHIPQ8WWQ0 1821 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 CCDC141Q6ZP82 1450 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 ATG2AQ2TAZ0 1938 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 TRBV20-1A0A075B6N2 111 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 A0A0D9SG52 128 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 K7ERJ3 54 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 HBDP02042 147 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 MT-ND6P03923 174 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 CD2P06729 351 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 TRGC1P0CF51 173 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 PLA2G2AP14555 144 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 FXYD7P58549 80 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 C15orf56Q8N910 161 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 RBPMSQ93062 196 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 RAB37Q96AX2 223 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 C16orf74Q96GX8 76 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 ZNF714Q96N38 554 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 LITAFQ99732 161 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 OPRPNQ99935 248 aaPredicted RBP3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 SEC11CQ9BY50 192 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 DEFB126Q9BYW3 111 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 DPY30Q9C005 99 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 AGPAT4-IT1Q9H0P7 198 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 C11orf1Q9H5F2 150 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 C16orf95Q9H693 158 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 FKBP11Q9NYL4 201 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 LINC00588Q9Y4M8 146 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 GLI3P10071 1580 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 KDM5DQ9BY66 1539 aa3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 GPATCH8Q9UKJ3 1502 aaKnown RBP3.49□□□□□ -1.85
TOPBP1-210ENST00000572787 MED1Q15648 1581 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 IGHV1-3A0A0C4DH29 117 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 RER1O15258 196 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 SYNGR2O43760 224 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 IGHV3-7P01780 117 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 PMP2P02689 132 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 IGHV4-34P06331 123 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 CTSDP07339 412 aaPredicted RBP3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 P0C879 139 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 CGB3P0DN86 165 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 CGB7P0DN87 165 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 T-ENOLP0DO92 83 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 HLA-DMBP28068 263 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 SNRPD3P62318 126 aaKnown RBP3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 DPTQ07507 201 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 KLRD1Q13241 179 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 C9orf153Q5TBE3 101 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 C18orf65Q6ZTR6 163 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 BPIFA4PQ86YQ2 179 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 AQP10Q96PS8 301 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 SCGB3A1Q96QR1 104 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 GABARAPL1Q9H0R8 117 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 PRO1933Q9H354 126 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 AP4S1Q9Y587 144 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 OTOFQ9HC10 1997 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 QRICH2Q9H0J4 1663 aa3.48□□□□□ -1.85
TOPBP1-210ENST00000572787 CFTRP13569 1480 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 TEX14Q8IWB6 1497 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 NUP210LQ5VU65 1888 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 C3orf85A0A1B0GTC6 90 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 A0A1W2PP18 115 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 TMEM262E9PQX1 116 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 APOC4-APOC2K7ER74 178 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 YPEL1O60688 119 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 IGHV1-46P01743 117 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 APOC2P02655 101 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 IGKV1-16P04430 117 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 LINC00032P0C843 101 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 TLX1NBP0CAT3 122 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 CCL3P10147 92 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 SLC25A16P16260 332 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 NANOS2P60321 138 aaKnown RBP3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 ZNF846Q147U1 533 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 ZNF705AQ6ZN79 300 aaPredicted RBP3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 NTM-AS1Q6ZSK4 140 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 Q8N976 141 aa3.47□□□□□ -1.85
TOPBP1-210ENST00000572787 DIRC1Q969H9 104 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms